Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0319
(597 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 2e-37
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 45 4e-05
SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13) 38 0.005
SB_53322| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_17219| Best HMM Match : Put_Phosphatase (HMM E-Value=5.7) 32 0.40
SB_44542| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 31 0.71
SB_25367| Best HMM Match : TPR_1 (HMM E-Value=2.4e-40) 31 0.93
SB_53102| Best HMM Match : CUB (HMM E-Value=3.3e-40) 31 0.93
SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038) 29 2.2
SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_21449| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20) 29 3.8
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 29 3.8
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 29 3.8
SB_40569| Best HMM Match : TPR_2 (HMM E-Value=2.8e-34) 28 6.6
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 28 6.6
SB_95| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_8343| Best HMM Match : TPR_1 (HMM E-Value=3.1e-10) 27 8.7
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 152 bits (369), Expect = 2e-37
Identities = 80/177 (45%), Positives = 111/177 (62%)
Frame = +2
Query: 65 RAVELNPDFSIAYIQKCYADYRHAQINKNVGALVQVRADFESALERFPRCAEAYILYAQV 244
++++LNPDF A IQ Y Y+ A +N FE P +A L+AQV
Sbjct: 399 KSIKLNPDFIPARIQLAYCIYKTAVFQQNAVLARGALELFEEISTNNPDNPDALSLHAQV 458
Query: 245 LSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCD 424
L +Q ++ A FD A+ + P N V+KGL+ +Q DF K+V+L+N+AI +D KCD
Sbjct: 459 LQEQGQFEEACEKFDTAIKLQPENPVHKVYKGLLMVQWKQDFGKSVELVNEAISIDSKCD 518
Query: 425 FAYETLGTIEVQRGNLRRSLELFEKAIALAKTELEMTHLFSLKDAAAAQLKVSERWG 595
FAYETL T+EVQRGNL +S+ELF+KAI L +TE EM FSL++AA AQ V+++ G
Sbjct: 519 FAYETLATLEVQRGNLEKSVELFDKAIDLVRTEGEMAQTFSLREAAIAQHHVTKKMG 575
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 50.8 bits (116), Expect = 8e-07
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Frame = +2
Query: 62 VRAVELNPDFSIAYIQKCYADYRHAQINKNVGALVQVRADFESALERFPRCAEAYILYAQ 241
++A+E P F++A+ +AQ G + FE A++ P +AYI
Sbjct: 184 LKAIETQPSFAVAWSN--LGCVFNAQ-----GEIWLAIHHFEKAVQLDPNFLDAYINLGN 236
Query: 242 VLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKC 421
VL + + + RA A + AL + PN+A ++ + V ++ D AV +AIE+
Sbjct: 237 VLKEARIFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQGL-IDLAVDTYRRAIELQPNF 295
Query: 422 DFAYETLGTIEVQRGNLRRSLELFEKAIALAKTELE-MTHLFSLK 553
AY L ++G + + E + A+ L+ T + + +L ++K
Sbjct: 296 PDAYCNLANALKEQGKVSEAEECYNTALQLSPTHADSLNNLANIK 340
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/126 (23%), Positives = 60/126 (47%)
Frame = +2
Query: 134 AQINKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPN 313
A I + G + + + ALE FP A A+ A VL Q + A + A+ + P
Sbjct: 337 ANIKREQGKIEESIRLYCKALEIFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRIHPT 396
Query: 314 NATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELF 493
A + + G + L++ D A++ ++AI+++ A+ L ++ GN+ +++ +
Sbjct: 397 FADAFSNMGNL-LKEMQDIQGAIQCYSRAIQINPAFADAHSNLASVHKDSGNIPEAIQSY 455
Query: 494 EKAIAL 511
A+ L
Sbjct: 456 RTALKL 461
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = +2
Query: 143 NKNVGALVQV-RADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNA 319
NK V L V R D E+ + C++ +Y+ +L Q+ +L + VD ++
Sbjct: 1308 NKPVKILTYVSRNDCENTILILSGCSKGMEIYSTILWHLQKEVELSSLAHHLVEVDRSSP 1367
Query: 320 TLYVHKG-LVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFE 496
+ G LQK + D A+K +A+++D C +AY LG V L R++ +
Sbjct: 1368 EAWCATGNCFSLQK--EHDTAIKFFQRAVQVDQACTYAYTLLGHEYVLTEELDRAMSCYR 1425
Query: 497 KAI 505
AI
Sbjct: 1426 MAI 1428
>SB_22125| Best HMM Match : TPR_1 (HMM E-Value=7.7e-13)
Length = 452
Score = 38.3 bits (85), Expect = 0.005
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Frame = +2
Query: 65 RAVELNPDFSIAYIQKCYADYRHA-QINKNVGALVQVRADFESALERFPRCAEAYILYAQ 241
+ ++ +P + A++ + A + QI +N A + +DF + + P+ E +I A+
Sbjct: 75 KIIKEHPKVTSAFLGRGTAYVKKGIQIKENSDAAI---SDFSTVISHSPKNPEGWIRRAE 131
Query: 242 VLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKC 421
VLS A AL++ P +A LY+ G + S D+ A K + K++E +
Sbjct: 132 VLSPIGRIPEAIKDISVALSLQP-SAELYLISGTLHFM-SEDYVTATKNLEKSLEYNPSQ 189
Query: 422 DFAYETL-------GTIEVQR-GNLRRSLELFEKAIALAKTELEMTHL 541
A L G I+VQ G+ + E F A+ L E HL
Sbjct: 190 ATATLYLGLSLYHRGLIQVQELGDASAAYEHFTAALLLEPRSAETFHL 237
Score = 36.7 bits (81), Expect = 0.014
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Frame = +2
Query: 128 RHAQINKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVD 307
R A++ +G + + D AL P AE Y++ + +++ A + +L +
Sbjct: 128 RRAEVLSPIGRIPEAIKDISVALSLQPS-AELYLISGTLHFMSEDYVTATKNLEKSLEYN 186
Query: 308 PNNAT--LYV-----HKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRG 466
P+ AT LY+ H+GL+Q+Q+ D A + A+ ++ + + G ++ G
Sbjct: 187 PSQATATLYLGLSLYHRGLIQVQELGDASAAYEHFTAALLLEPRSAETFHLRGMLQYMNG 246
Query: 467 NLRRSLELFE 496
+L F+
Sbjct: 247 KPALALNDFK 256
>SB_53322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 35 EWMRQLLNLVRAVELNPDFSIAYIQKCYADYRHAQINKNVGALVQVRADFESALERFPRC 214
EW +Q+ +R P+ AY + + Q + + +V++ SAL+RFP
Sbjct: 68 EWQKQVDEALRVSRTGPEDGSAYTLLVFTGFTEGQAFRLIDLIVRIFVTRLSALKRFPNT 127
Query: 215 A 217
A
Sbjct: 128 A 128
>SB_17219| Best HMM Match : Put_Phosphatase (HMM E-Value=5.7)
Length = 500
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 302 VDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEV 457
V + LY H G V ST + L+ A +D+KC F +T GT E+
Sbjct: 37 VSMRSCPLY-HPGSVGFNISTGVPRVGTLLEAAWNLDEKCRFKVQTSGTQEI 87
>SB_44542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 173 RADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYV 331
R FE + + ++ YAQ QQE RA ++++ +L VD N T+++
Sbjct: 68 RKAFEDNIRKNRSVVANWLKYAQWEESQQEIQRARSVYERSLDVDHRNITIWL 120
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 31.1 bits (67), Expect = 0.71
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = +2
Query: 365 DFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIALAKTELEMTHLF 544
D++K + +A D+ D AY LG GNL+++L FEK + +A E+T L
Sbjct: 861 DYEKYLAAAQQAESAYDQ-DKAYRGLGVALKTTGNLQQALVCFEKRLVVA---YELTDL- 915
Query: 545 SLKDAAAAQL 574
S K AA +L
Sbjct: 916 SSKAAAYGEL 925
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 368 FDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIALAK 517
F+K + + + ++ K AY LGT+ GN +++ FE+ ++LAK
Sbjct: 902 FEKRLVVAYELTDLSSKAA-AYGELGTLHKALGNYEQAIAFFEQQLSLAK 950
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 365 DFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIAL 511
DF KAV+L ++AI++D Y ++ L ++LE +KA L
Sbjct: 37 DFQKAVELYSEAIKLDPNNHVLYGNRSAACIRTWQLEQALEDGKKAAEL 85
>SB_25367| Best HMM Match : TPR_1 (HMM E-Value=2.4e-40)
Length = 553
Score = 30.7 bits (66), Expect = 0.93
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 167 QVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLV 346
Q A + +A + P+C + AE F ALA+ PN+ ++ G++
Sbjct: 348 QAMAAYFTASKLMPKCHLPLLYIGLEYGKTNNAKLAERFFKEALALSPNDPFVHQELGVI 407
Query: 347 QLQKSTDFDKAVKLINKAIEMDDKC--DFAYETLGTIEVQRGNLRRSLELFEKAIA 508
+ Q D+ +A K ++++ K + +T ++ G+ R +E+A++
Sbjct: 408 KYQNG-DYLQAEKHFKESLQKAQKVSGEVLSQTWESLMTNLGHTFRKQGKYEEALS 462
>SB_53102| Best HMM Match : CUB (HMM E-Value=3.3e-40)
Length = 644
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 160 STNILINLCMSIVSITFLNIGNGKIWIKFYSSYQI 56
S +L LC S TF++ G +W+KF+S+Y+I
Sbjct: 461 SNRMLDRLCGSTFPRTFVSSGQS-LWVKFHSNYRI 494
>SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)
Length = 1172
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 431 YETLGTIEVQRGNLRRSLELFEKAIALAKTELEMTHLFSLKDAAAA-QLKVSE 586
++ G + + GN L+L E A A L H+ L+D AAA LK+ E
Sbjct: 18 FKNRGLVCLSHGNTEHLLDLLEDAQATLAVMLTSRHIGPLRDEAAAWALKLKE 70
>SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2
Query: 533 SFLVQF*LMQWPFQTILVIFLGFP-FVLQWCPRFHRQSHICHPSRLLYLSI*QLYQNLCS 357
S+L +M + Q +LV+ L F F+ CP FHR +H+ + ++ LY ++ S
Sbjct: 488 SYLSVSGMMTYTSQVLLVVVLTFERFLSITCPIFHR-NHVTFRAAVITSLTILLYSSVFS 546
Query: 356 FV 351
FV
Sbjct: 547 FV 548
>SB_21449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 356 KSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAI 505
++T KAV+L+ KAIE D ++ +G +G + + + AI
Sbjct: 213 RATRMQKAVQLLQKAIETDPNSGSSWYLIGRCYAMQGKVHDAFTSYRHAI 262
>SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20)
Length = 1195
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/85 (24%), Positives = 38/85 (44%)
Frame = +2
Query: 215 AEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLIN 394
A Y L S+ A ++ A+ V+P+ A + +GL +++ S K V N
Sbjct: 1078 AGVYFLIGMCQSEVHNDSGALDAYNEAIKVNPDYAEAFYQRGLTKMKLS--HTKGVHDFN 1135
Query: 395 KAIEMDDKCDFAYETLGTIEVQRGN 469
+A+ ++ K A GT+ + N
Sbjct: 1136 RALAINPKLFQALMDYGTVMLLETN 1160
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 344 VQLQKSTDFDKAVKLINKA---IEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIALA 514
V+L++ +KA L+ K+ +++ +CD L IEV+ L ++ EK + A
Sbjct: 516 VELKEQAQNEKATLLLEKSQAVSKIEKECDELKRKLNNIEVEAARLNSLVQESEKGLGSA 575
Query: 515 KTELE 529
+ ++
Sbjct: 576 SSHID 580
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 446 TIEVQRGNLRRSLELFEKAIALAKTELEM---THLFSLKDAAAAQLK 577
++ VQR N+RR+ + + +A+T L+ +L S+KD A +L+
Sbjct: 405 SLGVQRENMRRARDRLRDSFRVARTVLDQADPVYLLSIKDVIADRLR 451
>SB_40569| Best HMM Match : TPR_2 (HMM E-Value=2.8e-34)
Length = 330
Score = 27.9 bits (59), Expect = 6.6
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 7/170 (4%)
Frame = +2
Query: 17 CIYY*-REWMRQLLNLVRAVELNPDFSIAYIQKCYADYRHAQINKNVGALVQVRADFESA 193
CI++ R++ L +A+ NP+ A + + ++NK L + R F+ A
Sbjct: 4 CIFFNKRDYKNALAFYKKALRTNPNCPGAV--RLGMGHCFVKLNK----LDKARLAFKRA 57
Query: 194 LERFPRCAEAYI-LYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKS--- 361
LE PRC A + L L+ ++++ + + L A A + QL ++
Sbjct: 58 LELEPRCTGAMVGLAILELNSKKDYSKVQHL--ALHAFHGTEVEAMQAESCYQLARAFHV 115
Query: 362 -TDFDKAVKLINKAIEM-DDKCDFAYETLGTIEVQRGNLRRSLELFEKAI 505
DFD+A + +A + + LG + + R +L + + FEK +
Sbjct: 116 QGDFDQAFQYYYQATQFASPNFILPHFGLGQMYIARRDLNNASQCFEKVL 165
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 27.9 bits (59), Expect = 6.6
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 7/170 (4%)
Frame = +2
Query: 17 CIYY*-REWMRQLLNLVRAVELNPDFSIAYIQKCYADYRHAQINKNVGALVQVRADFESA 193
CI++ R++ L +A+ NP+ A + + ++NK L + R F+ A
Sbjct: 139 CIFFNKRDYKNALAFYKKALRTNPNCPGAV--RLGMGHCFVKLNK----LDKARLAFKRA 192
Query: 194 LERFPRCAEAYI-LYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKS--- 361
LE PRC A + L L+ ++++ + + L A A + QL ++
Sbjct: 193 LELEPRCTGAMVGLAILELNSKKDYSKVQHL--ALHAFHGTEVEAMQAESCYQLARAFHV 250
Query: 362 -TDFDKAVKLINKAIEM-DDKCDFAYETLGTIEVQRGNLRRSLELFEKAI 505
DFD+A + +A + + LG + + R +L + + FEK +
Sbjct: 251 QGDFDQAFQYYYQATQFASPNFILPHLGLGQMYIARRDLNNASQCFEKVL 300
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +3
Query: 99 PIFKNVMLTIDMHRLIRMLVLWFKSEQILKVLWKDFLDVLKLIFCMHKFCQ 251
PI K+ L + ++ L E V ++ F D L C+H FC+
Sbjct: 40 PIIKSKTLRVSKQSSLKKLQRALNDELRCSVCYEVFSDPRTLTACLHSFCK 90
>SB_95| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +2
Query: 278 ALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEV 457
A D A N + +G KS A + KA++++ K A+ LG
Sbjct: 56 ATLDYIQASSENTSRCLYLRGKALNVKSEYDSMAEDALTKAVKLEPKLVEAWNCLGECYW 115
Query: 458 QRGNLRRSLELFEKAIALAKTELEMTHL 541
++GN+ + F A++ +K + + +L
Sbjct: 116 KKGNVAAARNCFVGALSHSKNKASLRNL 143
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +2
Query: 167 QVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLV 346
++ ADFE++L PR E + + G A ++ D A+ P + L
Sbjct: 1298 ELAADFENSLSSLPRFLEVAAEIVKESNKLDVAGEARSISDRVEALVP--LITITNNKLS 1355
Query: 347 QLQKSTDFDKAVK---LINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFE 496
+Q+ +K++K + + +E +F + + +E + NL+ L+ E
Sbjct: 1356 VMQRDFLQEKSIKEHVVFLREVESRLDVEFCLDRIDDVEKELENLKSILDSLE 1408
>SB_8343| Best HMM Match : TPR_1 (HMM E-Value=3.1e-10)
Length = 225
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 332 HKGLVQLQKST-DFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAI 505
+K L L ++ D++KA +A+ +DD + +GT+ ++ NL + + F++ +
Sbjct: 67 YKNLAVLAENRGDWEKATDAYLEAVLLDDSDVTVWYHIGTVAIKSSNLGLARQAFQEGL 125
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,780,611
Number of Sequences: 59808
Number of extensions: 319180
Number of successful extensions: 766
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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