Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0319
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein. 49 2e-06
AC006708-13|AAF60415.1| 788|Caenorhabditis elegans Metaphase-to... 49 2e-06
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 47 1e-05
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 47 1e-05
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 47 1e-05
AF314195-1|AAK01173.1| 820|Caenorhabditis elegans OSM-5 protein. 45 5e-05
AC006761-7|AAF60551.2| 820|Caenorhabditis elegans Osmotic avoid... 45 5e-05
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 39 0.002
U40060-5|AAA81143.2| 690|Caenorhabditis elegans Hypothetical pr... 35 0.038
U64856-4|AAB04988.2| 506|Caenorhabditis elegans Bbs (bardet-bie... 34 0.067
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 31 0.47
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 31 0.47
U41020-2|AAA82332.3| 1732|Caenorhabditis elegans Osmotic avoidan... 31 0.82
DQ360811-1|ABC88648.1| 1737|Caenorhabditis elegans intraflagella... 31 0.82
U80843-2|AAB37965.1| 117|Caenorhabditis elegans Hypothetical pr... 30 1.4
U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z35663-3|CAA84723.1| 480|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical p... 28 4.4
Z81486-12|CAC42272.1| 585|Caenorhabditis elegans Hypothetical p... 28 4.4
AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic ac... 28 4.4
AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear recep... 28 4.4
AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical ... 28 4.4
AL034391-2|CAA22301.2| 585|Caenorhabditis elegans Hypothetical ... 28 4.4
AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear recep... 28 4.4
AF139093-1|AAD48771.1| 585|Caenorhabditis elegans muscarinic ac... 28 4.4
AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear horm... 28 4.4
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z37139-4|CAA85488.1| 231|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein. 28 5.8
AF077542-13|AAC26302.1| 294|Caenorhabditis elegans Hypothetical... 28 5.8
AC006722-2|AAK68422.1| 296|Caenorhabditis elegans Hypothetical ... 28 5.8
AC006645-7|AAF39840.1| 296|Caenorhabditis elegans Hypothetical ... 28 5.8
Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 27 7.7
>AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein.
Length = 788
Score = 49.2 bits (112), Expect = 2e-06
Identities = 35/109 (32%), Positives = 53/109 (48%)
Frame = +2
Query: 185 ESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKST 364
E A++ R A AY L L Q E +A F +AL + P + + GLV L+K
Sbjct: 585 ERAIQLDKRFAYAYTLLGHELIVQDELDKAAGSFRSALLLSPRDYRAWYGLGLVHLKKEQ 644
Query: 365 DFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIAL 511
+ A+ I KA+ ++ TL IE QRG + +L L ++A+ L
Sbjct: 645 NLT-ALTNIQKAVNINPTNRAMLCTLSQIEQQRGQIDTALVLIDRALTL 692
>AC006708-13|AAF60415.1| 788|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform a protein.
Length = 788
Score = 49.2 bits (112), Expect = 2e-06
Identities = 35/109 (32%), Positives = 53/109 (48%)
Frame = +2
Query: 185 ESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKST 364
E A++ R A AY L L Q E +A F +AL + P + + GLV L+K
Sbjct: 585 ERAIQLDKRFAYAYTLLGHELIVQDELDKAAGSFRSALLLSPRDYRAWYGLGLVHLKKEQ 644
Query: 365 DFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIAL 511
+ A+ I KA+ ++ TL IE QRG + +L L ++A+ L
Sbjct: 645 NLT-ALTNIQKAVNINPTNRAMLCTLSQIEQQRGQIDTALVLIDRALTL 692
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/126 (24%), Positives = 57/126 (45%)
Frame = +2
Query: 134 AQINKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPN 313
A I + G + + ALE +P A A+ A +L Q + A + A+ + P
Sbjct: 438 ANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLNDAILHYKEAIRIAPT 497
Query: 314 NATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELF 493
A Y + G L++ D A+ N+AI+++ A+ L +I GN+ +++ +
Sbjct: 498 FADAYSNMGNT-LKEMGDSSAAIACYNRAIQINPAFADAHSNLASIHKDAGNMAEAIQSY 556
Query: 494 EKAIAL 511
A+ L
Sbjct: 557 STALKL 562
Score = 37.9 bits (84), Expect = 0.005
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Frame = +2
Query: 47 QLLNLVRAVELNPDFSIAYIQKCYADYRH-AQINKNVGALVQVRADFESALERFPRCAEA 223
Q NL ++++ + +I +C Y + K G L +++ A++ P +A
Sbjct: 171 QTKNLEKSMQYSM-LAIKVNNQCAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDA 229
Query: 224 YILYAQVLSDQQEWGRAEALFDAALAVDPNNATLY-VHKGLVQLQKSTD-FDKAVKLINK 397
YI A L + +A + AL ++P+ LY V L L K+ ++A K
Sbjct: 230 YINLAAALVSGGDLEQAVTAYFNALQINPD---LYCVRSDLGNLLKAMGRLEEAKVCYLK 286
Query: 398 AIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIAL 511
AIE + A+ LG + +G + ++ FEKA+ L
Sbjct: 287 AIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTL 324
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/126 (24%), Positives = 57/126 (45%)
Frame = +2
Query: 134 AQINKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPN 313
A I + G + + ALE +P A A+ A +L Q + A + A+ + P
Sbjct: 260 ANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLNDAILHYKEAIRIAPT 319
Query: 314 NATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELF 493
A Y + G L++ D A+ N+AI+++ A+ L +I GN+ +++ +
Sbjct: 320 FADAYSNMGNT-LKEMGDSSAAIACYNRAIQINPAFADAHSNLASIHKDAGNMAEAIQSY 378
Query: 494 EKAIAL 511
A+ L
Sbjct: 379 STALKL 384
Score = 37.5 bits (83), Expect = 0.007
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 KNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATL 325
K G L +++ A++ P +AYI A L + +A + AL ++P+ L
Sbjct: 26 KEKGQLQDALENYKLAVKLKPEFIDAYINLAAALVSGGDLEQAVTAYFNALQINPD---L 82
Query: 326 Y-VHKGLVQLQKSTD-FDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEK 499
Y V L L K+ ++A KAIE + A+ LG + +G + ++ FEK
Sbjct: 83 YCVRSDLGNLLKAMGRLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEK 142
Query: 500 AIAL 511
A+ L
Sbjct: 143 AVTL 146
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/126 (24%), Positives = 57/126 (45%)
Frame = +2
Query: 134 AQINKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPN 313
A I + G + + ALE +P A A+ A +L Q + A + A+ + P
Sbjct: 438 ANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLNDAILHYKEAIRIAPT 497
Query: 314 NATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELF 493
A Y + G L++ D A+ N+AI+++ A+ L +I GN+ +++ +
Sbjct: 498 FADAYSNMGNT-LKEMGDSSAAIACYNRAIQINPAFADAHSNLASIHKDAGNMAEAIQSY 556
Query: 494 EKAIAL 511
A+ L
Sbjct: 557 STALKL 562
Score = 37.9 bits (84), Expect = 0.005
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Frame = +2
Query: 47 QLLNLVRAVELNPDFSIAYIQKCYADYRH-AQINKNVGALVQVRADFESALERFPRCAEA 223
Q NL ++++ + +I +C Y + K G L +++ A++ P +A
Sbjct: 171 QTKNLEKSMQYSM-LAIKVNNQCAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDA 229
Query: 224 YILYAQVLSDQQEWGRAEALFDAALAVDPNNATLY-VHKGLVQLQKSTD-FDKAVKLINK 397
YI A L + +A + AL ++P+ LY V L L K+ ++A K
Sbjct: 230 YINLAAALVSGGDLEQAVTAYFNALQINPD---LYCVRSDLGNLLKAMGRLEEAKVCYLK 286
Query: 398 AIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIAL 511
AIE + A+ LG + +G + ++ FEKA+ L
Sbjct: 287 AIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTL 324
>AF314195-1|AAK01173.1| 820|Caenorhabditis elegans OSM-5 protein.
Length = 820
Score = 44.8 bits (101), Expect = 5e-05
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Frame = +2
Query: 143 NKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNAT 322
N ++ ++V F S + A + + L + A+ D AL++D NA
Sbjct: 415 NGDIEGAIEVLKVFNSQDSKTASAAANNLCMLRFLQGGRRLVDAQQYADQALSIDRYNAH 474
Query: 323 LYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEK- 499
V++G + D DKA+ +A+ D C A +G +GNL ++LE F K
Sbjct: 475 AQVNQGNIAYMNG-DLDKALNNYREALNNDASCVQALFNIGLTAKAQGNLEQALEFFYKL 533
Query: 500 -AIALAKTE--LEMTHLF-SLKDAAAA 568
I L + +++ ++ SL+D+A A
Sbjct: 534 HGILLNNVQVLVQLASIYESLEDSAQA 560
>AC006761-7|AAF60551.2| 820|Caenorhabditis elegans Osmotic
avoidance abnormal protein5 protein.
Length = 820
Score = 44.8 bits (101), Expect = 5e-05
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Frame = +2
Query: 143 NKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNAT 322
N ++ ++V F S + A + + L + A+ D AL++D NA
Sbjct: 415 NGDIEGAIEVLKVFNSQDSKTASAAANNLCMLRFLQGGRRLVDAQQYADQALSIDRYNAH 474
Query: 323 LYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEK- 499
V++G + D DKA+ +A+ D C A +G +GNL ++LE F K
Sbjct: 475 AQVNQGNIAYMNG-DLDKALNNYREALNNDASCVQALFNIGLTAKAQGNLEQALEFFYKL 533
Query: 500 -AIALAKTE--LEMTHLF-SLKDAAAA 568
I L + +++ ++ SL+D+A A
Sbjct: 534 HGILLNNVQVLVQLASIYESLEDSAQA 560
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +2
Query: 254 QQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAY 433
Q+++ +A +D A+ +DP+N T Y +K V ++ F + V+ KA+E+ + Y
Sbjct: 18 QKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEK-KFAECVQFCEKAVEVGRETRADY 76
Query: 434 ETLGTIEVQRGNL---RRSLELFEKAIALAKTELEMTHLFSLKDAAAAQLKVSER 589
+ + + GN + L L + + +E L QLK +ER
Sbjct: 77 KLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKVKELEKQLKAAER 131
Score = 33.9 bits (74), Expect = 0.088
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = +2
Query: 101 YIQKCYADYRHAQINKNVGALVQVRADFESALERFPRCA-------EAYILYAQVLSDQQ 259
Y + D +A + N A + +F+ AL+ C + YI A L +
Sbjct: 163 YNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMR 222
Query: 260 EWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFD 373
EW +A+ ++ AL VDP+N +G+ +S D D
Sbjct: 223 EWSKAQRAYEDALQVDPSNEE--AREGVRNCLRSNDED 258
>U40060-5|AAA81143.2| 690|Caenorhabditis elegans Hypothetical
protein F38B6.6 protein.
Length = 690
Score = 35.1 bits (77), Expect = 0.038
Identities = 24/95 (25%), Positives = 44/95 (46%)
Frame = +2
Query: 227 ILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIE 406
+L ++ EW +L+ + L+V P NA ++ + G V D A K AI+
Sbjct: 402 LLISKTYRRSGEWKTELSLYSSGLSVCPTNAKIHYNLGKVLGDNGLTKD-AEKNYWNAIK 460
Query: 407 MDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIAL 511
+D + A LG + + G+ + + L +A+ L
Sbjct: 461 LDPSYEQALNNLGNLLEKSGDSKTAESLLARAVTL 495
>U64856-4|AAB04988.2| 506|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 8 protein.
Length = 506
Score = 34.3 bits (75), Expect = 0.067
Identities = 25/98 (25%), Positives = 44/98 (44%)
Frame = +2
Query: 215 AEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLIN 394
A+ + Q+L D + A F AL+ DP+++ V+ G+++ + D+A L +
Sbjct: 388 ADVWYNIGQILVDIGDLVSAARSFRIALSHDPDHSESLVNLGILK-HREGKIDEARSLYS 446
Query: 395 KAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIA 508
A + LG + +G EL EKA+A
Sbjct: 447 SATSKNPYMFEGNYNLGLVSFTQGKYHECRELIEKALA 484
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 31.5 bits (68), Expect = 0.47
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Frame = +2
Query: 98 AYIQKCYADYRHAQINKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAE 277
A + C+ +Y++A + G + +F SA+ R +A +A +S + +
Sbjct: 385 ATFRTCFKNYKNAL---DQGEETKFLKNF-SAVYLLVRSVQAVEQWASEISTMFDEKAMD 440
Query: 278 ALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAI---EMDDKCDFAYETLGT 448
F+ + P+N Q++K T+FD +K+INK + + + AY+T +
Sbjct: 441 VYFEELEKLTPSNIK-------EQVEKITNFDDFLKIINKFTMLKSLQTQYESAYKTSNS 493
Query: 449 IEVQRGNLRRSLELFEKAIALAKTELEMTHLFSL 550
E+ + L + + L K +L+ + L +
Sbjct: 494 SELSLSKIITDAGLVDTSKCLEKDKLDSSKLLKM 527
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 31.5 bits (68), Expect = 0.47
Identities = 21/124 (16%), Positives = 61/124 (49%)
Frame = +2
Query: 128 RHAQINKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVD 307
++ + +++G + + R+ FE AL+ R ++ YA++ ++ A +FD A+ +
Sbjct: 91 KYGKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAITIM 150
Query: 308 PNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLE 487
P ++ ++ + + A ++ + IE + + A++T E++ + R+
Sbjct: 151 PRAMQFWLKYSYME-EVIENIPGARQIFERWIEWEPP-EQAWQTYINFELRYKEIDRARS 208
Query: 488 LFEK 499
++++
Sbjct: 209 VYQR 212
>U41020-2|AAA82332.3| 1732|Caenorhabditis elegans Osmotic avoidance
abnormal protein1 protein.
Length = 1732
Score = 30.7 bits (66), Expect = 0.82
Identities = 29/118 (24%), Positives = 50/118 (42%)
Frame = +2
Query: 86 DFSIAYIQKCYADYRHAQINKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEW 265
D + +++ + ++ H + K + R D ++A E+F + + + + D + W
Sbjct: 1004 DDVLRLVERYHGEHMH-ETRKRFATQYEERGDLKAAEEQFLKAGD-FRSAVNMYKDSEMW 1061
Query: 266 GRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYET 439
A + A N V L KS D AVKL+NK + + DFA ET
Sbjct: 1062 SDA---YRIAKTEGGENMEKQV---LFMWAKSIGGDAAVKLLNKHGMLMEGIDFACET 1113
>DQ360811-1|ABC88648.1| 1737|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1737
Score = 30.7 bits (66), Expect = 0.82
Identities = 29/118 (24%), Positives = 50/118 (42%)
Frame = +2
Query: 86 DFSIAYIQKCYADYRHAQINKNVGALVQVRADFESALERFPRCAEAYILYAQVLSDQQEW 265
D + +++ + ++ H + K + R D ++A E+F + + + + D + W
Sbjct: 1009 DDVLRLVERYHGEHMH-ETRKRFATQYEERGDLKAAEEQFLKAGD-FRSAVNMYKDSEMW 1066
Query: 266 GRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYET 439
A + A N V L KS D AVKL+NK + + DFA ET
Sbjct: 1067 SDA---YRIAKTEGGENMEKQV---LFMWAKSIGGDAAVKLLNKHGMLMEGIDFACET 1118
>U80843-2|AAB37965.1| 117|Caenorhabditis elegans Hypothetical
protein C32B5.11 protein.
Length = 117
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +2
Query: 194 LERFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPN---NATLYVHKGLVQLQKST 364
LE + AE++ +VL D + + ++++D N ++ L +H G +
Sbjct: 31 LELLDQKAESFWSKFRVLLDPKSIPFKSLELNGSISIDDNVIQSSELLIHNGRLDENIDL 90
Query: 365 DFDKAVKLINKAIEM 409
+F+K +KL N+ +E+
Sbjct: 91 EFEKLLKLANQQVEL 105
>U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical
protein K06A1.3 protein.
Length = 488
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 332 HKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIAL 511
H G + L+ +T+ + K D C F+ T E + ++ R E K +A
Sbjct: 36 HSGFMSLKVNTEKSPPSHVFVKGHFRKDGCSFSNTANATFEFSKCDVMRQREANPKGMAY 95
Query: 512 AKTELEMTH-LFSLKDAAAAQLK 577
T + H LF+ K A +L+
Sbjct: 96 TATVVVQLHPLFTTKVDRAYKLR 118
>Z35663-3|CAA84723.1| 480|Caenorhabditis elegans Hypothetical
protein T04A8.5 protein.
Length = 480
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 329 VHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIA 508
+H+G V L TD + ++I KAI ++ KC + E G++ R L + A+
Sbjct: 125 LHEG-VGLSTDTDSELIAQMIAKAIALNVKCKYGQE--------MGDITRELAVTMSALN 175
Query: 509 LAKTELEMT--HLFSLKD 556
++ + L MT L++++D
Sbjct: 176 MSYSLLVMTFDRLYAIRD 193
>Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -3
Query: 217 STSRKSFQSTFKICSDLNQSTNILINLCMSIVSITFLNIGNGKIWIKFYSSYQIQQLPH- 41
STS SF T+ S L + +++ + + + ++GN + + F Q+Q + +
Sbjct: 43 STSTPSFVDTYSTSSLLGEEGRMVMIVVIGAMFALVTSLGNLMVMVSFKIDKQLQTISNY 102
Query: 40 -PFSLIINTLVLGL 2
FSL + + +G+
Sbjct: 103 FLFSLAVADIAIGV 116
>Z81486-12|CAC42272.1| 585|Caenorhabditis elegans Hypothetical
protein Y40H4A.1a protein.
Length = 585
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -3
Query: 217 STSRKSFQSTFKICSDLNQSTNILINLCMSIVSITFLNIGNGKIWIKFYSSYQIQQLPH- 41
STS SF T+ S L + +++ + + + ++GN + + F Q+Q + +
Sbjct: 43 STSTPSFVDTYSTSSLLGEEGRMVMIVVIGAMFALVTSLGNLMVMVSFKIDKQLQTISNY 102
Query: 40 -PFSLIINTLVLGL 2
FSL + + +G+
Sbjct: 103 FLFSLAVADIAIGV 116
>AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic
acetylcholine receptorlarge isoform protein.
Length = 611
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -3
Query: 217 STSRKSFQSTFKICSDLNQSTNILINLCMSIVSITFLNIGNGKIWIKFYSSYQIQQLPH- 41
STS SF T+ S L + +++ + + + ++GN + + F Q+Q + +
Sbjct: 43 STSTPSFVDTYSTSSLLGEEGRMVMIVVIGAMFALVTSLGNLMVMVSFKIDKQLQTISNY 102
Query: 40 -PFSLIINTLVLGL 2
FSL + + +G+
Sbjct: 103 FLFSLAVADIAIGV 116
>AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 409
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 77 LNPDFSIAYIQKCYADYRHAQINKNVGALVQVRADFESALERFPR 211
LNPD I+ + + +I K + + ++ D ++A+ERF R
Sbjct: 315 LNPDADISLPARKLVNNERVRITKQLYGYMAMKDDVDTAIERFAR 359
>AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -3
Query: 217 STSRKSFQSTFKICSDLNQSTNILINLCMSIVSITFLNIGNGKIWIKFYSSYQIQQLPH- 41
STS SF T+ S L + +++ + + + ++GN + + F Q+Q + +
Sbjct: 43 STSTPSFVDTYSTSSLLGEEGRMVMIVVIGAMFALVTSLGNLMVMVSFKIDKQLQTISNY 102
Query: 40 -PFSLIINTLVLGL 2
FSL + + +G+
Sbjct: 103 FLFSLAVADIAIGV 116
>AL034391-2|CAA22301.2| 585|Caenorhabditis elegans Hypothetical
protein Y40H4A.1a protein.
Length = 585
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -3
Query: 217 STSRKSFQSTFKICSDLNQSTNILINLCMSIVSITFLNIGNGKIWIKFYSSYQIQQLPH- 41
STS SF T+ S L + +++ + + + ++GN + + F Q+Q + +
Sbjct: 43 STSTPSFVDTYSTSSLLGEEGRMVMIVVIGAMFALVTSLGNLMVMVSFKIDKQLQTISNY 102
Query: 40 -PFSLIINTLVLGL 2
FSL + + +G+
Sbjct: 103 FLFSLAVADIAIGV 116
>AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear receptor
protein protein.
Length = 418
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 77 LNPDFSIAYIQKCYADYRHAQINKNVGALVQVRADFESALERFPR 211
LNPD I+ + + +I K + + ++ D ++A+ERF R
Sbjct: 324 LNPDADISLPARKLVNNERVRITKQLYGYMAMKDDVDTAIERFAR 368
>AF139093-1|AAD48771.1| 585|Caenorhabditis elegans muscarinic
acetylcholine receptor protein.
Length = 585
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -3
Query: 217 STSRKSFQSTFKICSDLNQSTNILINLCMSIVSITFLNIGNGKIWIKFYSSYQIQQLPH- 41
STS SF T+ S L + +++ + + + ++GN + + F Q+Q + +
Sbjct: 43 STSTPSFVDTYSTSSLLGEEGRMVMIVVIGAMFALVTSLGNLMVMVSFKIDKQLQTISNY 102
Query: 40 -PFSLIINTLVLGL 2
FSL + + +G+
Sbjct: 103 FLFSLAVADIAIGV 116
>AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform a protein.
Length = 418
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 77 LNPDFSIAYIQKCYADYRHAQINKNVGALVQVRADFESALERFPR 211
LNPD I+ + + +I K + + ++ D ++A+ERF R
Sbjct: 324 LNPDADISLPARKLVNNERVRITKQLYGYMAMKDDVDTAIERFAR 368
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 308 PNNATLYVHKGLVQLQKSTDFDKAVKLINKAIEMDDKCDFAY 433
PN Y L + ST +KL AI+ D CD+ Y
Sbjct: 455 PNYPNYYPSNALCRYHLSTTVGNRIKLDFGAIDTDQCCDYIY 496
>Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical
protein F10B5.6 protein.
Length = 655
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 371 DKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIAL 511
++A+ KAI M+ K A + GN+ ++ E F KA+A+
Sbjct: 512 NEAIMFYQKAIRMEPKFVDAIASTALCYAVLGNIDKATEFFNKALAI 558
>Z37139-4|CAA85488.1| 231|Caenorhabditis elegans Hypothetical
protein C14B1.8 protein.
Length = 231
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 205 KSFQSTFKICSDLNQSTNILINLCMSIVS 119
K+++ FK+ NQS N ++N M I+S
Sbjct: 178 KNYKELFKLACFSNQSANSILNSAMKIIS 206
>AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein.
Length = 655
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 371 DKAVKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIAL 511
++A+ KAI M+ K A + GN+ ++ E F KA+A+
Sbjct: 512 NEAIMFYQKAIRMEPKFVDAIASTALCYAVLGNIDKATEFFNKALAI 558
>AF077542-13|AAC26302.1| 294|Caenorhabditis elegans Hypothetical
protein Y57G7A.10a protein.
Length = 294
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/105 (18%), Positives = 48/105 (45%)
Frame = +2
Query: 200 RFPRCAEAYILYAQVLSDQQEWGRAEALFDAALAVDPNNATLYVHKGLVQLQKSTDFDKA 379
+FP+ L A L + + +A +++ + +PNN + K V L + D A
Sbjct: 81 QFPKSNRVLKLKAMQLESTEHYQKALDIYERLVEDEPNNNSFRKRKVAVLLAQGKRLD-A 139
Query: 380 VKLINKAIEMDDKCDFAYETLGTIEVQRGNLRRSLELFEKAIALA 514
++ IN +++ A+ L + + ++ +++ E+ + ++
Sbjct: 140 IRAINDYLKIFLNDPEAWLQLSELFLLENDVAKAVHCLEECVLIS 184
>AC006722-2|AAK68422.1| 296|Caenorhabditis elegans Hypothetical
protein Y19D10A.9 protein.
Length = 296
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 223 SFSTSRKSFQSTFKICSDLNQSTNILINLCMS--IVSITFLNIGNGKIWI 80
SF T ++F + CS NQ+ +L N + + SI G K WI
Sbjct: 32 SFYTETRNFDGAERACSGNNQNLAVLHNTLQTNFLASIVRSQTGATKFWI 81
>AC006645-7|AAF39840.1| 296|Caenorhabditis elegans Hypothetical
protein F56A4.2 protein.
Length = 296
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 223 SFSTSRKSFQSTFKICSDLNQSTNILINLCMS--IVSITFLNIGNGKIWI 80
SF T ++F + CS NQ+ +L N + + SI G K WI
Sbjct: 32 SFYTETRNFDGAERACSGNNQNLAVLHNTLQTNFLASIVRSQTGATKFWI 81
>Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical
protein ZC302.1 protein.
Length = 728
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 99 AMEKSGLSSTALTKFSSCLIHSL 31
A+E+ GL+++A F SCL+H +
Sbjct: 535 AIEEGGLATSANRNFDSCLMHQI 557
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 DQQEWGRAEALFDAALAVD-PNNATLYVHKGLVQ 349
++ EWG F+AALA++ NNA+L G+ +
Sbjct: 85 EKDEWGTVLEAFEAALALERANNASLLKLHGIAE 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,784,183
Number of Sequences: 27780
Number of extensions: 252675
Number of successful extensions: 847
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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