Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0317
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.4  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    23   2.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.8  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   9.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.8  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 430 PVDGLQQYCFSEHHFHMGERSQATSQV 510
           P D +  Y   +HH H G    A S V
Sbjct: 63  PADSMVNYTLGQHH-HNGAAVSAASSV 88


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 430 PVDGLQQYCFSEHHFHMGERSQATSQV 510
           P D +  Y   +HH H G    A S V
Sbjct: 122 PADSMVNYTLGQHH-HNGAAVSAASSV 147


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 430 PVDGLQQYCFSEHHFHMGERSQATSQV 510
           P D +  Y   +HH H G    A S V
Sbjct: 63  PADSMVNYTLGQHH-HNGAAVSAASSV 88


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 430 PVDGLQQYCFSEHHFHMGERSQATSQV 510
           P D +  Y   +HH H G    A S V
Sbjct: 122 PADSMVNYTLGQHH-HNGAAVSAASSV 147


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 421 PRDPVDGLQQY 453
           PRD VD LQQ+
Sbjct: 647 PRDGVDTLQQF 657


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 439 GLQQYCFSEHHFH 477
           G+  Y  S+HH H
Sbjct: 44  GMSPYASSQHHHH 56


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +2

Query: 269 IAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHR 385
           +  + G+   F +     +VFA++  F G   +    HR
Sbjct: 443 VMNINGVLFVFLTNMTFQNVFAVINVFSGELPVFLQEHR 481


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +2

Query: 269 IAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHR 385
           +  + G+   F +     +VFA++  F G   +    HR
Sbjct: 443 VMNINGVLFVFLTNMTFQNVFAVINVFSGELPVFLQEHR 481


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,147
Number of Sequences: 336
Number of extensions: 2925
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)