Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0316
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    27   0.13 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.3  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -3

Query: 244 FGFPADRRSDLGLSVCLGLSVCHCYCNFGSSDDRFDYTTTG 122
           FGF     S  G   CL LS+ +C C +  S   F  +  G
Sbjct: 25  FGFLPVCSSQKGQKTCLNLSINYCICGYIFSAILFSLSILG 65


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 466 TDYPGCCNDPGHHNSEHYND 407
           +D P     P H+++ HY D
Sbjct: 27  SDIPNAQQMPPHYSNYHYED 46


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 466 TDYPGCCNDPGHHNSEHYND 407
           +D P     P H+++ HY D
Sbjct: 27  SDIPNAQQMPPHYSNYHYED 46


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 466 TDYPGCCNDPGHHNSEHYND 407
           +D P     P H+++ HY D
Sbjct: 27  SDIPNAQQMPPHYSNYHYED 46


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 114 YLCDYKRYYCNLEYSAGVC 58
           Y C  + + CN   SA VC
Sbjct: 152 YKCGIQYHICNTVISATVC 170


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 114 YLCDYKRYYCNLEYSAGVC 58
           Y C  + + CN   SA VC
Sbjct: 148 YKCGIQYHICNTVISATVC 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.133    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,016
Number of Sequences: 336
Number of extensions: 2058
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)