Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0316
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK122625-1|BAC85495.1|  438|Homo sapiens protein ( Homo sapiens ...    32   1.4  
AB028140-1|BAB20375.1|  457|Homo sapiens spinesin protein.             29   9.9  

>AK122625-1|BAC85495.1|  438|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16046 fis, clone CTONG2013178, weakly  similar
           to Homo sapiens serine protease DESC1 (DESC1) mRNA. ).
          Length = 438

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +2

Query: 17  VVAVTSIGRSCAAPQTPALYSRLQ*YR 97
           +V + S G+SCA P+ P +Y+R+  YR
Sbjct: 403 IVGIVSWGQSCALPKKPGVYTRVTKYR 429


>AB028140-1|BAB20375.1|  457|Homo sapiens spinesin protein.
          Length = 457

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 14  RVVAVTSIGRSCAAPQTPALYSRL 85
           R+V V S GR+CA P  P +Y+++
Sbjct: 418 RLVGVVSWGRACAEPNHPGVYAKV 441


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.133    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,537,607
Number of Sequences: 237096
Number of extensions: 1320663
Number of successful extensions: 3113
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3109
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)