Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0316
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   1.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   4.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.5  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +3

Query: 84  YSSTVYNRTNIQQPVVV*S--KRSSDEPKLQ*Q*QTDKPRQTDKPKSLRRSAGKPKSSQQ 257
           + +  Y    ++QPV V    KR SD    +       P   D P SLRR   K  +SQ 
Sbjct: 286 FRTPTYRMQQVEQPVQVYIQLKRPSDGATSEPFPFLMLPLGADDPDSLRRKRQKINNSQN 345

Query: 258 S 260
           +
Sbjct: 346 A 346


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 117 EYLCDYKRYYCNLEYSAGVCGAAQDLPIEVT 25
           EY C    Y+ N EYS     +   +P  VT
Sbjct: 115 EYECSRIDYFPNEEYSPDPSDSTMAIPYAVT 145


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 186 DKPRQTDKPKSLRRSAGKPKSSQQSTL 266
           D+P    +P S  + +G  +S QQS +
Sbjct: 269 DRPSDEAEPSSTSKKSGIVRSHQQSCI 295


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 613 FDNSLQHVSCHFGN*NSQSLE 551
           FDN  Q ++ HFG  ++  LE
Sbjct: 219 FDNCDQRINYHFGMTDNSRLE 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.133    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,314
Number of Sequences: 438
Number of extensions: 2551
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)