Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0314
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.47 
DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted ...    25   1.4  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       24   3.3  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 18/85 (21%), Positives = 39/85 (45%)
 Frame = +1

Query: 322 FKFASHTVIYLLNPCHVTTLIQIYLLAAPPSKIVTALFRIHLYLLNGPLLAFLFPETASR 501
           F+F++   +Y+L+P +    + IY+L  P    + +LF I   L+N  L+      T   
Sbjct: 124 FRFSATNALYVLDPFNPIRRVAIYILVHP----LFSLFIITTILVNCILMIMPTTPTVES 179

Query: 502 KIFVEAALYWIQHGMMCIIPYYLLR 576
              +   +Y  +  +  +   ++L+
Sbjct: 180 TEVIFTGIYTFESAVKVMARGFILQ 204


>DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 144

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 138 EGTFRAHISWD-SFICTTIRPLEHFYNIF 55
           EGTF AHI  D S + TT+ P     N +
Sbjct: 23  EGTFLAHIPVDVSTLTTTLHPCNRLSNSY 51


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 112 LGQLYLHHYTP 80
           +G+ +LHHYTP
Sbjct: 33  MGETWLHHYTP 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,733
Number of Sequences: 2352
Number of extensions: 13623
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)