Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0314
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-12|CAO78731.1|  318|Caenorhabditis elegans Hypothetical p...    95   5e-20
Z78417-11|CAE17739.1|  294|Caenorhabditis elegans Hypothetical p...    95   5e-20
AF047658-6|AAY86253.1|  295|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z68114-8|CAA92162.1|  317|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z78417-12|CAO78731.1|  318|Caenorhabditis elegans Hypothetical
           protein C35C5.10b protein.
          Length = 318

 Score = 94.7 bits (225), Expect = 5e-20
 Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
 Frame = +1

Query: 70  MFEWAYSGANKAVPRNVGPECAFFLTPQRKIIETIIVFLICVYLLVKTYPILKIPIDTDY 249
           ++E A  G + ++  N G EC  +L   ++ +E+I+   +  +        + IP+D  +
Sbjct: 29  IWELAIGGIDSSIQGNGGEECMNYLPSWQRFLESIVFIPLSFWAAY-----MSIPLDCSF 83

Query: 250 TKSDRGGKRXXXXXXXXX-WGMEIGFKFASHTVIYLLNPCHVTTLIQIYLLAAP-PSKIV 423
           T   R   R          +G E+ +K  S T I+LLNPCHVTT +Q+ LL     SK  
Sbjct: 84  TLPTRNVSRYVILTVYSLIFGAELAYKMISRTGIFLLNPCHVTTTMQLMLLTMEGTSKKA 143

Query: 424 TALFRIHLYLLNGPLLAFLFPETASRKIFVEAALYWIQHGMMCIIPYYLLRLGGVYNIE 600
             LFR+ LY + G   A  FP   +R +  E  +Y+ QH  + ++P YL+ + G +  E
Sbjct: 144 CFLFRLMLYFMPGAWFALAFPILNTRNLPGEVFIYYAQHVAILVVPVYLMYIQGAFEPE 202


>Z78417-11|CAE17739.1|  294|Caenorhabditis elegans Hypothetical
           protein C35C5.10a protein.
          Length = 294

 Score = 94.7 bits (225), Expect = 5e-20
 Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
 Frame = +1

Query: 70  MFEWAYSGANKAVPRNVGPECAFFLTPQRKIIETIIVFLICVYLLVKTYPILKIPIDTDY 249
           ++E A  G + ++  N G EC  +L   ++ +E+I+   +  +        + IP+D  +
Sbjct: 5   IWELAIGGIDSSIQGNGGEECMNYLPSWQRFLESIVFIPLSFWAAY-----MSIPLDCSF 59

Query: 250 TKSDRGGKRXXXXXXXXX-WGMEIGFKFASHTVIYLLNPCHVTTLIQIYLLAAP-PSKIV 423
           T   R   R          +G E+ +K  S T I+LLNPCHVTT +Q+ LL     SK  
Sbjct: 60  TLPTRNVSRYVILTVYSLIFGAELAYKMISRTGIFLLNPCHVTTTMQLMLLTMEGTSKKA 119

Query: 424 TALFRIHLYLLNGPLLAFLFPETASRKIFVEAALYWIQHGMMCIIPYYLLRLGGVYNIE 600
             LFR+ LY + G   A  FP   +R +  E  +Y+ QH  + ++P YL+ + G +  E
Sbjct: 120 CFLFRLMLYFMPGAWFALAFPILNTRNLPGEVFIYYAQHVAILVVPVYLMYIQGAFEPE 178


>AF047658-6|AAY86253.1|  295|Caenorhabditis elegans Hypothetical
           protein K03H6.6 protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 136 FFLTPQRKIIETIIVFLICVYLL 204
           FFL  +RKI++TI +F  C +L+
Sbjct: 243 FFLAFRRKILQTICIFCACYFLI 265


>Z68114-8|CAA92162.1|  317|Caenorhabditis elegans Hypothetical
           protein F17A2.11 protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 501 EDFCGSCLVLDTTWYDVYYTLLFIETWRR 587
           E +C S LVL  T++D Y TL  +  +R+
Sbjct: 266 EQYCISVLVLLPTFFDPYITLYSVAPYRK 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,638,940
Number of Sequences: 27780
Number of extensions: 317425
Number of successful extensions: 803
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)