Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0313
         (310 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036713-1|AAH36713.1|  542|Homo sapiens ATG16L2 protein protein.      28   4.8  
AK093017-1|BAC04021.1|  619|Homo sapiens protein ( Homo sapiens ...    28   4.8  
AK090597-1|BAC03485.1|  513|Homo sapiens protein ( Homo sapiens ...    28   4.8  

>BC036713-1|AAH36713.1|  542|Homo sapiens ATG16L2 protein protein.
          Length = 542

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 308 LNRIYCSRTVNIHNFC 261
           L R YCSRT+N+ ++C
Sbjct: 374 LGRAYCSRTINVLSYC 389


>AK093017-1|BAC04021.1|  619|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35698 fis, clone SPLEN2019839, weakly similar to
           TIPD PROTEIN. ).
          Length = 619

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 308 LNRIYCSRTVNIHNFC 261
           L R YCSRT+N+ ++C
Sbjct: 451 LGRAYCSRTINVLSYC 466


>AK090597-1|BAC03485.1|  513|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33278 fis, clone ASTRO2008508, weakly similar to
           TIPD PROTEIN. ).
          Length = 513

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 308 LNRIYCSRTVNIHNFC 261
           L R YCSRT+N+ ++C
Sbjct: 345 LGRAYCSRTINVLSYC 360


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,632,128
Number of Sequences: 237096
Number of extensions: 387833
Number of successful extensions: 481
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)