Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0313
         (310 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p...    26   4.7  
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr...    26   4.7  
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p...    26   4.7  
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr...    26   4.7  
Z68333-2|CAA92722.1|  149|Caenorhabditis elegans Hypothetical pr...    25   8.1  

>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
           protein C25G4.10 protein.
          Length = 1208

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 187 RDHADCCECTSVSFEC 140
           RDH+DCC  + V+ +C
Sbjct: 948 RDHSDCCIASGVTSKC 963


>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
           protein T04A11.3 protein.
          Length = 1014

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 187 RDHADCCECTSVSFEC 140
           RDH+DCC  + V+ +C
Sbjct: 754 RDHSDCCIASGVTSKC 769


>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
           protein C25G4.10 protein.
          Length = 1208

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 187 RDHADCCECTSVSFEC 140
           RDH+DCC  + V+ +C
Sbjct: 948 RDHSDCCIASGVTSKC 963


>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical
           protein F01G4.3 protein.
          Length = 1266

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 160 YIHNSQHGHDQRKHLIMSNNHVKI 231
           YI+N + GH   + LIM   HVKI
Sbjct: 409 YINNEERGHVWEEVLIMLPAHVKI 432


>Z68333-2|CAA92722.1|  149|Caenorhabditis elegans Hypothetical
           protein C05C12.5 protein.
          Length = 149

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 211 SNNHVKIQPKSYQGLRRQKL*ILTVLE 291
           S NH+ ++ KSY  L ++K  I+T L+
Sbjct: 86  SVNHIDVKSKSYLALDKKKALIMTSLK 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,759,226
Number of Sequences: 27780
Number of extensions: 66003
Number of successful extensions: 110
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)