Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0312
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    29   0.018
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   2.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 29.5 bits (63), Expect = 0.018
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 61   FVACVSRILVPNSCSPGIH 5
            F  CV+  LVP +C+PG+H
Sbjct: 1221 FYVCVNGHLVPQNCAPGLH 1239



 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 81   NK*LSSCLWPASLESSCRIPAARGSTS 1
            NK    C WP S +   + P  + STS
Sbjct: 1138 NKERKICDWPKSAKCEEKKPGHKPSTS 1164


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 163 ARMFTEVVKNNPGKSVVLS 219
           AR FT+ +KN  G  +V++
Sbjct: 434 ARFFTDCIKNREGFEMVIA 452


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 324 YSIVVREADSFQK 286
           YSI++++ADSF K
Sbjct: 306 YSILIKKADSFCK 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,526
Number of Sequences: 336
Number of extensions: 2172
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)