Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0312
         (497 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      43   2e-04
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      31   0.40 
SB_41066| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)         28   4.9  
SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.9  
SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.9  
SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.9  
SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.9  
SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)           27   6.5  
SB_49672| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.5  
SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.5  
SB_18253| Best HMM Match : ADAM_spacer1 (HMM E-Value=4e-05)            27   8.6  
SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38)               27   8.6  

>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 23/93 (24%), Positives = 48/93 (51%)
 Frame = +1

Query: 217 SAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANK 396
           S  S++  LA   L + G T  ++ K   FP D   +     ++ +  +  G ++ MAN+
Sbjct: 33  SPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNASNSDGNQILMANR 92

Query: 397 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKN 495
           ++   G ++ E F   S++ F++++  +D+ KN
Sbjct: 93  LFAQMGFEILEEFKKASKESFSAEMALVDYVKN 125


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
 Frame = +1

Query: 241 LAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD---LRSIKGV-ELKMANKVYVH 408
           L  + L S G T  ++    G+ + +   T    K      L S  G  E+++ NK++ H
Sbjct: 5   LGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIWGH 64

Query: 409 DGGKLDENFAVVSRDVFNSDVQNIDF 486
           D  ++ E F   +R+ ++S++  +DF
Sbjct: 65  DEFEILEEFLHGTREFYHSEMAQVDF 90


>SB_41066| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 186

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -2

Query: 85  NKQMIVFMFVACVSRILVPNSCSPG 11
           +K + +++ +A VSR L+ NSCSPG
Sbjct: 46  DKAISMWLVLAPVSRTLLSNSCSPG 70


>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
          Length = 672

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 268 HQKLKLTEREEAAPKMPRGQRFSL 197
           HQ L + E + ++PK PR  +F L
Sbjct: 56  HQNLSINEMDSSSPKRPRQHQFGL 79


>SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 345

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 268 HQKLKLTEREEAAPKMPRGQRFSL 197
           HQ L + E + ++PK PR  +F L
Sbjct: 21  HQNLSINEMDSSSPKRPRQHQFGL 44


>SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 268 HQKLKLTEREEAAPKMPRGQRFSL 197
           HQ L + E + ++PK PR  +F L
Sbjct: 50  HQNLSINEMDSSSPKRPRQHQFGL 73


>SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 132

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 268 HQKLKLTEREEAAPKMPRGQRFSL 197
           HQ L + E + ++PK PR  +F L
Sbjct: 21  HQNLSINEMDSSSPKRPRQHQFGL 44


>SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 118

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 268 HQKLKLTEREEAAPKMPRGQRFSL 197
           HQ L + E + ++PK PR  +F L
Sbjct: 7   HQNLSINEMDSSSPKCPRQHQFGL 30


>SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
          Length = 1541

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 411  WWKTRREFCSRFQGRLQFGRPK 476
            W + RRE+C++ Q R ++ +P+
Sbjct: 1275 WLRWRREYCTQLQSRQKWNKPQ 1296


>SB_49672| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 132

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 268 HQKLKLTEREEAAPKMPRGQRF 203
           H+ L + ER+ ++PK PR  +F
Sbjct: 21  HENLSINERDSSSPKRPRQHQF 42


>SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 924

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 184 VKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAI 324
           ++  P  S VLS  S  PPL  +    +  T   + + I  PD++A+
Sbjct: 221 IELGPQSSGVLSLTSDPPPLEAMGKEGEAHTDSGVEEEIDIPDEEAV 267


>SB_18253| Best HMM Match : ADAM_spacer1 (HMM E-Value=4e-05)
          Length = 339

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 23  GIRHEDSRDAGHKHEDNHLF 82
           GIR   SRDAGH  E  H F
Sbjct: 79  GIRDRGSRDAGHVFEKGHGF 98


>SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38)
          Length = 501

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 159 EVIVSIFEHIREICDGCH 106
           +VI++ +EH +  CDGCH
Sbjct: 356 DVIIARYEHNKCRCDGCH 373


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,100,900
Number of Sequences: 59808
Number of extensions: 292805
Number of successful extensions: 863
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)