Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0312
(497 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 0.75
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 1.3
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 1.3
At1g10385.1 68414.m01170 hypothetical protein 29 1.7
At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containi... 29 2.3
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 2.3
At5g01060.1 68418.m00009 protein kinase family protein contains ... 28 3.0
At2g43210.2 68415.m05371 UBX domain-containing protein contains ... 28 3.0
At2g43210.1 68415.m05370 UBX domain-containing protein contains ... 28 3.0
At5g57580.1 68418.m07194 calmodulin-binding protein similar to c... 28 4.0
At2g32620.1 68415.m03982 cellulose synthase family protein simil... 28 4.0
At2g20210.1 68415.m02363 leucine-rich repeat family protein cont... 27 5.3
At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1) ... 27 7.0
At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1) ... 27 7.0
At1g67650.1 68414.m07720 expressed protein 27 7.0
At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containi... 27 7.0
At1g27580.1 68414.m03361 F-box family protein similar to F-box p... 27 7.0
At3g09060.1 68416.m01065 pentatricopeptide (PPR) repeat-containi... 27 9.3
At2g34610.1 68415.m04252 expressed protein 27 9.3
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 0.75
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 219 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDG 112
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 243 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 130
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 178 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 291
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At1g10385.1 68414.m01170 hypothetical protein
Length = 754
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 188 FTTSVNILAVKLSFPFLSTLERFVTAAIAAAADSKQTNDCLHVCGLRLSN 39
+T+ + AVK + F L+R A+ AAA + T +C+ +C S+
Sbjct: 303 YTSELVTWAVKQAESFALLLKRHTLASSAAAGSLRVTAECVQLCASHCSS 352
>At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 511
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 118 TNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA 297
T +S +NGN + +MF + K+ K ++ SVLP A L G E +
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 298 IGFPDD 315
GF D+
Sbjct: 244 NGFFDN 249
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 216 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 124
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g01060.1 68418.m00009 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 499
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 187 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFA 339
KN P K+ + L P +D + ELL+ +G+ +D+ + EF+
Sbjct: 337 KNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFS 387
>At2g43210.2 68415.m05371 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 380 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 201
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 200 PG 195
G
Sbjct: 195 KG 196
>At2g43210.1 68415.m05370 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 380 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 201
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 200 PG 195
G
Sbjct: 195 KG 196
>At5g57580.1 68418.m07194 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 647
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 51 QATNMKTIICLFTIGGGGNGS 113
++ +M+ + LF++GGGGNGS
Sbjct: 556 ESEDMQQFLRLFSMGGGGNGS 576
>At2g32620.1 68415.m03982 cellulose synthase family protein similar
to Zea mays cellulose synthase-5 [gi:9622882], -4
[gi:9622880], -9 [gi:9622890]
Length = 757
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1
Query: 341 LANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILA 162
L+ +V + S P+ S S + PS+ + + G TE PG F VN+ A
Sbjct: 627 LSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVL-VNLAA 685
Query: 161 V 159
+
Sbjct: 686 L 686
>At2g20210.1 68415.m02363 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 604
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +1
Query: 130 NVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 309
N+ KN TAR ++++ P + ++++++PP A L L T + LK +
Sbjct: 503 NISKNRGGLETARFLSKLIPLAPKLISIDASYNLMPPEALLMLCDSLRTAKGDLKRLDMT 562
Query: 310 DDDAIRTE 333
+ I E
Sbjct: 563 GNSCISHE 570
>At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 289 LKAIGFPDDDAIRTEFASKSRDLR 360
++++GFP DD R F DLR
Sbjct: 121 IESVGFPQDDGFRLGFGGGGGDLR 144
>At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 289 LKAIGFPDDDAIRTEFASKSRDLR 360
++++GFP DD R F DLR
Sbjct: 121 IESVGFPQDDGFRLGFGGGGGDLR 144
>At1g67650.1 68414.m07720 expressed protein
Length = 651
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +1
Query: 136 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 315
L++G + +R++ E+VKN+ ++ ++ LA++ + E +E+ LK + P
Sbjct: 470 LRHGQEEEASRLYEEIVKNHNSTDALV---GLVTTLARVNV-EKAEAYEKQLKPL--PGL 523
Query: 316 DAIRTEFASKSRDLRSIKGV 375
A+ + K+ + I+G+
Sbjct: 524 KAVDVDNLEKTSGAKPIEGI 543
>At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 491
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 121 NLSNVLKNGNDNFTARMFTEVVK 189
NL +LKNG DN A +F +++
Sbjct: 431 NLLEILKNGTDNIGAEIFEPLIR 453
>At1g27580.1 68414.m03361 F-box family protein similar to F-box
protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]; confirmed by FLcDNA GI:16604421; contains
uncharacterized Arabidoppsis domain shared by 33
Arabidopsis proteins;simlar to unknown protein
GB:AAC63676
Length = 364
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 280 EELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYV 405
EE +K + D+D R EF + DLR V+ K N V V
Sbjct: 96 EENVKHMLMDDEDPFRDEFPHAAEDLRGRLWVDDKNGNYVVV 137
>At3g09060.1 68416.m01065 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 687
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3
Query: 240 RRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDGC 109
R Q KC ED A + +GK+S + + +F+ +REI GC
Sbjct: 70 RSQECKCDEDVALS--VIKTYGKNSMPDQALDVFKRMREIF-GC 110
>At2g34610.1 68415.m04252 expressed protein
Length = 290
Score = 26.6 bits (56), Expect = 9.3
Identities = 31/129 (24%), Positives = 45/129 (34%), Gaps = 10/129 (7%)
Frame = +1
Query: 136 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELL---KAIGF 306
L N T R+ V KN P + V + A + + L KA G
Sbjct: 137 LPNKKAKVTERIIQAVSKNQPRNKAIEKCEPVTEQNVHIIAAKEETCNASNLMNSKAYGR 196
Query: 307 PDDDAIRTEFASKSRDLRSIKG-------VELKMANKVYVHDGGKLDENFAVVSRDVFNS 465
D R SK R + IK + + + VH G K DE ++ N
Sbjct: 197 SKSDKARGSVISKERRRQEIKHRHKSYDRSQSDSSKWMVVHKGKKADEEMEEATKKWENV 256
Query: 466 DVQNIDFSK 492
++ +FSK
Sbjct: 257 KEESEEFSK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,606,662
Number of Sequences: 28952
Number of extensions: 205585
Number of successful extensions: 738
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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