Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0311
(438 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC651.03c |gyp10||GTPase activating protein Gyp10|Schizosaccha... 27 0.96
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 2.9
SPAC7D4.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 2.9
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 25 5.1
SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 5.1
SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2 |Schizosacc... 25 5.1
SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces pombe... 25 5.1
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 6.7
SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2 alpha-1,... 24 8.9
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 24 8.9
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 24 8.9
>SPBC651.03c |gyp10||GTPase activating protein
Gyp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 373
Score = 27.5 bits (58), Expect = 0.96
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 234 DTCLAVYQVPFSSLRYPILQAHPYSHFSSSTN-WQKM 127
+TC + VPFSSL Q PYS ++ + W+ M
Sbjct: 271 NTCATISAVPFSSLPLDRYQISPYSCLRNTGDPWEYM 307
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.8 bits (54), Expect = 2.9
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Frame = +1
Query: 277 LRACVVRRTAQSWASCL-----NVKRNRQSCAS 360
+RAC+V+ Q WA CL + R+ Q C S
Sbjct: 2057 VRACIVQGFQQIWACCLWYWGSYIDRSMQECHS 2089
>SPAC7D4.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 25.8 bits (54), Expect = 2.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 210 VPFSSLRYPILQAHPYSHFSSSTNW 136
VPFS++ PI Y+ F S+T+W
Sbjct: 56 VPFSAINLPIRFLIFYNAFRSNTSW 80
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 25.0 bits (52), Expect = 5.1
Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -2
Query: 266 EVFIHWTRHSWTLVLRYTK--FHFRLSDIL 183
E+F+ W +H++ + Y K + R +D+L
Sbjct: 423 ELFVDWLKHAFIIKFNYIKPSIYSRFTDVL 452
>SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 5.1
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 213 QVPFSSLRYP-ILQAHPYSHFSSSTNWQKMISFFSMHF*GLH 91
Q+ + L +P PYS S W+ + S F+ +F +H
Sbjct: 232 QLAAALLAFPEFTNGSPYSLLLSDDRWEYLASLFTSNFTAVH 273
>SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 849
Score = 25.0 bits (52), Expect = 5.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 323 QLAQLCAVLLTTHALSAVREVFIHWTRHSWTLVL 222
QL + C V TH L A RE+ IH+ + +VL
Sbjct: 359 QLTKACGV---THKLRAFRELLIHFPKWRGHVVL 389
>SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 5.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -2
Query: 278 SAVREVFIHWTRHSWTLVLRYTKF 207
S + ++F++ RHSW+ + Y K+
Sbjct: 424 SGLMDIFVYLWRHSWSNGIDYAKW 447
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 24.6 bits (51), Expect = 6.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 7 RSVSVRQHHRPLYSYLSRKRRADLPSRFMQ 96
R +VR+ + LY Y+ RA PS+ Q
Sbjct: 49 RYATVREDNGKLYLYMKTIERAHFPSKLWQ 78
>SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2
alpha-1,3-glucosyltransferase Alg12 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 546
Score = 24.2 bits (50), Expect = 8.9
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 1 LDRSVSVRQHHRPLYSYLSRKRRADLPS 84
+ R +S+R +P+Y ++K RA P+
Sbjct: 462 IPREISIRNPAQPVYILANKKARATKPA 489
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 24.2 bits (50), Expect = 8.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 148 IN*LAEDDIIFFDALLRSA*TLKAGPLFVFWTSSCTEDDDV 26
IN + DA + +A T K G F++S C + DDV
Sbjct: 276 INPTGTSKALALDADIDAALTDKEGWFIQFYSSECDDCDDV 316
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 24.2 bits (50), Expect = 8.9
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 96 LHKP*RQVRSSFSGQVAVQRTMMLTN 19
+HK +R + +G+ A+ R++++TN
Sbjct: 377 IHKGANPLRGNLTGETALMRSVLVTN 402
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,916,808
Number of Sequences: 5004
Number of extensions: 41333
Number of successful extensions: 143
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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