Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0311
(438 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.006
SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.059
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0) 33 0.14
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.18
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.96
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 29 1.3
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 29 1.7
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 29 1.7
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_11439| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_43808| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32) 28 3.9
SB_43806| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31) 28 3.9
SB_33236| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32) 28 3.9
SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062) 28 3.9
SB_12758| Best HMM Match : EGF (HMM E-Value=2.5e-15) 28 3.9
SB_34027| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_31406| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31) 28 3.9
SB_20014| Best HMM Match : EGF_CA (HMM E-Value=1.6e-18) 28 3.9
SB_4814| Best HMM Match : NTP_transf_2 (HMM E-Value=0.6) 28 3.9
SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08) 27 5.1
SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0) 27 5.1
SB_40246| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_1584| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_8875| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_57139| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_32644| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 6.8
SB_27916| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_25969| Best HMM Match : fn3 (HMM E-Value=3.1e-13) 27 6.8
SB_19938| Best HMM Match : TolA (HMM E-Value=0.22) 27 6.8
SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0) 27 6.8
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 27 6.8
SB_30304| Best HMM Match : fn3 (HMM E-Value=1.5e-32) 27 6.8
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 27 6.8
SB_16712| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09) 27 8.9
SB_1668| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11) 27 8.9
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 27 8.9
SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 27 8.9
SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 37.1 bits (82), Expect = 0.006
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +3
Query: 222 QDKCPTVP---CPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTEL-CEPGCVCEGGFL 389
+D CPT P CP +++ CA C + G+ ++C +S E C+P C
Sbjct: 332 EDNCPTRPPYTCPPSDF--TCANSQCVPNSFRCDGE-NDCGDRSDESGCKPTTTCSANEF 388
Query: 390 RSKNGTCV-SIDECHRE 437
R +G C+ S C RE
Sbjct: 389 RCDDGRCITSTFRCDRE 405
>SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1712
Score = 33.9 bits (74), Expect = 0.059
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +3
Query: 222 QDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCV-CEGGFLRSK 398
++ CP PC N++ C G C + K C S EL GC CE F R
Sbjct: 1340 EEDCP--PCKENQF--RCDNGQCIDGD-PRCDKYKNCTDGSDEL---GCATCEPNFFRCN 1391
Query: 399 NGTCVS 416
G C+S
Sbjct: 1392 TGKCIS 1397
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 32.7 bits (71), Expect = 0.14
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = +3
Query: 288 CRQENCTELGKLSECKTQSTELCE--PG---CVCEGGF-LRSKNGTCVSIDEC 428
C Q NC ++ + S + C PG C C GF L ++ +CV IDEC
Sbjct: 578 CDQRNCLDIDECSSNLHICNQTCNNVPGSYYCTCFPGFYLMMEDQSCVDIDEC 630
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 18/86 (20%)
Frame = +3
Query: 225 DKCPTVPCPVNE--------YFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGC---- 368
D+C T+P N+ Y +C G + T L EC T + CE C
Sbjct: 472 DECLTIPAICNQTCSNIPGSYVCSCVTGYYLGVDNTTCLDLDECSTNANN-CEQRCTNSL 530
Query: 369 ---VCE---GGFLRSKNGTCVSIDEC 428
+C G L S +CV +DEC
Sbjct: 531 GSFICSCWTGYILGSDYKSCVDVDEC 556
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 9/65 (13%)
Frame = +3
Query: 261 YFTNCAKGMCRQENCTELGKLSECKTQST---ELCE--PG---CVCEGGF-LRSKNGTCV 413
Y C+ G + T + EC T + C PG C C G+ L N TC+
Sbjct: 451 YSCECSAGYVLSSDFTSCLDVDECLTIPAICNQTCSNIPGSYVCSCVTGYYLGVDNTTCL 510
Query: 414 SIDEC 428
+DEC
Sbjct: 511 DLDEC 515
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 366 CVCEGGFLRSKNGTCVSIDEC 428
C C G+ + +G CV I+EC
Sbjct: 295 CTCFEGYHLTSDGQCVDINEC 315
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 366 CVCEGGFLRSKNG-TCVSIDEC 428
C C G S++G +CV +DEC
Sbjct: 378 CTCPEGLALSEDGKSCVDVDEC 399
>SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 651
Score = 32.7 bits (71), Expect = 0.14
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +3
Query: 222 QDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQS--TELCEPG-----CVCEG 380
Q C +P Y +C KG + ECKT S ++LC C C
Sbjct: 238 QQTCTNLP---GSYRCSCYKGYELDLDGKTCSDKDECKTGSNCSQLCTNTAGGYQCSCHH 294
Query: 381 GFLRSKNG-TCVSIDECHR 434
G++ S N CV +DEC R
Sbjct: 295 GYVLSANQHACVDVDECAR 313
Score = 31.1 bits (67), Expect = 0.42
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Frame = +3
Query: 270 NCAKGMCRQENCTELGKLSECKTQS---TELC-----EPGCVCEGGF-LRSKNGTCVSID 422
+C G + + ECKT + ++ C C C+ G+ L + TCV ID
Sbjct: 6 SCRSGFALASDKRACRDIDECKTNNGGCSQRCLNTNGSRACACDAGYDLEADGVTCVDID 65
Query: 423 ECHR 434
EC +
Sbjct: 66 ECKK 69
Score = 31.1 bits (67), Expect = 0.42
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Frame = +3
Query: 261 YFTNCAKGMCRQENCTELGKLSECKTQS---TELC---EPG--CVCEGGFLRSKNG-TCV 413
++ +C G Q + T ++EC T + + C E G C C G+ + G CV
Sbjct: 84 FYCSCRHGYALQADNTTCADINECVTSNGNCSHTCVNWEGGFNCTCAEGYALTYGGYECV 143
Query: 414 SIDEC 428
IDEC
Sbjct: 144 DIDEC 148
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Frame = +3
Query: 273 CAKGMCRQENCTELGKLSECKTQSTE-LCEPG-----CVCEGGF-LRSKNGTCVSIDEC 428
CA+G E + EC ++ + C C C GF L S N TC IDEC
Sbjct: 129 CAEGYALTYGGYECVDIDECSSKPCDHTCRNTNGSFVCSCREGFRLLSDNTTCRDIDEC 187
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 366 CVCEGGFLRSKNGTCVSIDEC 428
CVC GF + K G C++IDEC
Sbjct: 982 CVCRRGFTK-KEGNCINIDEC 1001
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 31.5 bits (68), Expect = 0.31
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 354 CEPGCVCEGGFLRSKNGTCVSIDEC 428
C GC C G + NGTCV +C
Sbjct: 1248 CVSGCYCPDGLIMHDNGTCVQSMQC 1272
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 29.9 bits (64), Expect = 0.96
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +3
Query: 264 FTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCVCEGGFLRSKNGTCVSIDEC 428
F CA CR N G + C + C C G+ + C IDEC
Sbjct: 2057 FDECAMSPCRCANQNNFGCNATCINTAGSFV---CKCSKGYTLIRGTICQDIDEC 2108
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Frame = +3
Query: 261 YFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCV---------CEGGF-LRSKNGTC 410
Y C +G N T ++EC+ Q+ + C+ C G+ L ++ C
Sbjct: 499 YRCECGQGFVPNANQTHCSDVNECEVQNGGCGKHTCINTYGSYKCQCLDGYRLDARTEQC 558
Query: 411 VSIDECHR 434
V IDEC R
Sbjct: 559 VDIDECAR 566
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 228 KCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCVCEGGFLR--SKN 401
+CP V CP +E+ C G C + G+ +C S EL P C G ++ SKN
Sbjct: 2242 RCPEVTCPAHEF--TCPNGRCVSYDFLCDGE-DDCGDFSDELRCPPTTCVPGQVKCGSKN 2298
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +3
Query: 231 CPTVPCPVNEYFTNCAKGMC--RQENCTELGKLSECKTQSTELCEPGCVCEGGFLRSKNG 404
C PC V+E+ C G C C ++ + T+ C G NG
Sbjct: 2323 CRERPCNVSEF--RCTSGECVPASWRCDGDNDCTDKSDEPTDCQRSNATCTGAQFACDNG 2380
Query: 405 TCVS 416
C+S
Sbjct: 2381 RCIS 2384
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 366 CVCEGGF-LRSKNGTCVSIDEC 428
C C GF L S N TC I+EC
Sbjct: 1188 CSCRPGFTLASDNKTCEDINEC 1209
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 366 CVCEGGFLRSKNG-TCVSIDEC 428
C C GFL ++G TC IDEC
Sbjct: 562 CACREGFLLRQDGKTCEDIDEC 583
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 9/53 (16%)
Frame = +3
Query: 297 ENCTELGKLSECKTQSTELCEPGCV---------CEGGFLRSKNGTCVSIDEC 428
+ CTE+ C Q + C C+ C G+ C IDEC
Sbjct: 342 DECTEMSPRCRCANQKSASCNATCINTLGSYRCTCAKGYSLIGGTVCQDIDEC 394
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 29.1 bits (62), Expect = 1.7
Identities = 24/74 (32%), Positives = 31/74 (41%)
Frame = +3
Query: 195 ETKMELGIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCEPGCVC 374
+TKMEL D+C + PC TN G NCT + E + + C P C
Sbjct: 3830 QTKMELCQVADQCSSYPCKNGGTCTN--SGQSYTCNCTS-DYIGEHCEEKIDPCNP-TPC 3885
Query: 375 EGGFLRSKNGTCVS 416
+ G GTC S
Sbjct: 3886 QNG------GTCAS 3893
>SB_11439| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 29.1 bits (62), Expect = 1.7
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Frame = +3
Query: 195 ETKMELGIPQDKCP-------TVPCPVNEYFTNCAKGMCRQENCTE--LGKLSECKTQST 347
+TK ++ + Q+KCP +P +EY + AK + + E + GKL +TQ
Sbjct: 99 DTKKDVKVKQEKCPVKVQEIQVIPNEPSEYANDFAKALLKDEEPQQKARGKLLSGRTQKN 158
Query: 348 E--LCEPGCVCEGG 383
+ L PG V +GG
Sbjct: 159 KRMLLSPGKV-KGG 171
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +3
Query: 228 KCPTV---PCPVNEYFTNCAKGMCRQENCT-ELGK--LSECKTQSTELCEPGC 368
+CP + CP N +C C + CT +L K ECK ++C PGC
Sbjct: 1681 ECPLICCSVCPPNCSAQSCGN-FCPPKCCTSQLSKDRQKECKESCPKVCGPGC 1732
>SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1662
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 315 GKLSECKTQSTELCEPGCVCEGGFLRSKNGTCVSIDEC 428
G + C T S +L C C+ GF ++ C IDEC
Sbjct: 1457 GTNAHCVT-SFDLTHAACECKVGFQGNQQTGCQDIDEC 1493
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 366 CVCEGGFLRSKNGTCVSIDECHRE 437
C C GF+ + C IDECH++
Sbjct: 544 CTCNKGFI-GEGDLCTDIDECHQK 566
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 366 CVCEGGFLRSKNGTCVSIDECHR 434
C C GF++ NG CV ++EC +
Sbjct: 382 CRCHVGFIKL-NGECVDLNECQK 403
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 354 CEPGCVCEGGFLRSKNGTCVSIDECH 431
C PG CE +L +++G CV+ C+
Sbjct: 1249 CTPGYYCESDYLSTESGLCVAGYYCN 1274
>SB_43808| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32)
Length = 174
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 246 CPVNEYFTNCAKGMCRQENCTELGKLSECK 335
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_43806| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31)
Length = 174
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 246 CPVNEYFTNCAKGMCRQENCTELGKLSECK 335
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_33236| Best HMM Match : DNA_binding_1 (HMM E-Value=1.1e-32)
Length = 174
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 246 CPVNEYFTNCAKGMCRQENCTELGKLSECK 335
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062)
Length = 238
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 9/46 (19%)
Frame = +3
Query: 318 KLSECKTQST----ELCEPG-----CVCEGGFLRSKNGTCVSIDEC 428
KL CK Q+T ++C+ C C+ G + NG C+ ++EC
Sbjct: 8 KLRMCKLQATCNKRDICDTSRAKLRCCCDDGLV-FYNGLCIRVEEC 52
>SB_12758| Best HMM Match : EGF (HMM E-Value=2.5e-15)
Length = 165
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 10/68 (14%)
Frame = +3
Query: 237 TVPCPVNEYFTNCAKGMCRQ--ENCTELGKLSECKTQS--------TELCEPGCVCEGGF 386
T CP Y C + CR N E + CK ++ T +C+P CV GG+
Sbjct: 83 TCRCPKGYYGIGCRRAFCRNGCYNGGECVRPDVCKCRAGYEGPLCLTPVCKPSCV-NGGY 141
Query: 387 LRSKNGTC 410
N TC
Sbjct: 142 CVGSN-TC 148
>SB_34027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 101 QKCIEKNDII------FCQLVDEEKCEYGCACKIGYLRDENGTWYTARQVS 235
+ CI++N+ I F L +++ CE A I RDEN TA +S
Sbjct: 101 EHCIKQNNAIDIYEDYFPDLEEDQSCETPSAKTINVFRDENNIKRTATSIS 151
>SB_31406| Best HMM Match : DNA_binding_1 (HMM E-Value=1.9e-31)
Length = 174
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 246 CPVNEYFTNCAKGMCRQENCTELGKLSECK 335
CP N + +C K M Q T+LGK+S+CK
Sbjct: 46 CP-NSHLADCLKWM--QVYFTDLGKISKCK 72
>SB_20014| Best HMM Match : EGF_CA (HMM E-Value=1.6e-18)
Length = 184
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 366 CVCEGGFLRSKNG-TCVSIDEC 428
C C+ GF+ +G TC IDEC
Sbjct: 40 CACKRGFILRHDGKTCEDIDEC 61
>SB_4814| Best HMM Match : NTP_transf_2 (HMM E-Value=0.6)
Length = 426
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 309 ELGKLSECKTQSTELCEPG--CVCEGGFLRSKNGTCVSID 422
E GK+ E +TE+ +P C+ G + R K+ TC +D
Sbjct: 244 EAGKIGEVVKAATEIIDPSLLCITCGSYRRGKS-TCGDVD 282
>SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08)
Length = 303
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 366 CVCEGGFLRSKNGTCVSIDEC 428
C C+ GF S CV IDEC
Sbjct: 30 CYCKRGFKLSGQYHCVDIDEC 50
>SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 802
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 9/52 (17%)
Frame = +3
Query: 300 NCTELGKLSECKTQS---TELC--EPG---CVCEGGF-LRSKNGTCVSIDEC 428
N ++ + EC+ + +LC PG C C G+ L + N TC++++EC
Sbjct: 262 NISDKKNVDECQNNNGGCRDLCINTPGSFMCQCRQGYVLANDNKTCINLNEC 313
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 366 CVCEGGFLRSKNG-TCVSIDEC 428
C C G++ + +G TC IDEC
Sbjct: 729 CECREGYILNSDGITCSDIDEC 750
>SB_40246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 748
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 252 VNEYFTNCAKGMCRQENCTELGKLSECKTQSTELCE 359
VN +C +GM + EN +GK S + ++ +L E
Sbjct: 363 VNITIDSCQQGMSKSENNAPIGKASLAEEETFDLAE 398
>SB_1584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 239 SWTLVLRYTKFHFRLSDILFCRHIHIRTSPHQLIGRR 129
+++ LR K HF LFC +PHQL+ RR
Sbjct: 9 TYSKFLRTEKRHFGELAFLFCNSGATTATPHQLVIRR 45
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.5 bits (58), Expect = 5.1
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 16/77 (20%)
Frame = +3
Query: 246 CPVNEYFTNC-AKGMCR-----QENCTELGKLSECKTQST-----ELCEPG-----CVCE 377
C VN + TN +CR Q + + ECKT E+C C C
Sbjct: 428 CNVNAFCTNTPGTFVCRCIRGYQGDGRTCADVDECKTGQVKCGENEVCANSLGSFTCQCA 487
Query: 378 GGFLRSKNGTCVSIDEC 428
G+ R G C ++EC
Sbjct: 488 EGYERDSQGKCADVNEC 504
>SB_8875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = -3
Query: 397 FDLKKPPSQT---QPGSHSSVDCVLHSDNLPS 311
F+L+ PPS T QPGSH SVD L NL S
Sbjct: 42 FELR-PPSGTNHQQPGSHLSVDTRLSELNLGS 72
>SB_57139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 854
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 282 GMCRQENCTELGKLSECKTQSTELCEPG---CVCEGGFLRSKNGTCVSIDEC 428
G C+ + G L C + + PG C C G+ + GTC+ +DEC
Sbjct: 260 GECKDIDECSRGAL--CPANARCINTPGSYHCACVNGY--TGQGTCMDVDEC 307
>SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +3
Query: 330 CKTQSTELC--EPGCVCEGGFLRSKNG-TCVSIDEC 428
C+ LC + C C GF + +G TC+ IDEC
Sbjct: 459 CEQVCYNLCNLKVKCGCYPGFKMAYDGRTCIDIDEC 494
>SB_32644| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 365
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -3
Query: 427 HSSIDTHVPFFDLKKPPSQTQPGSHSSVDCVLHSDNLPSSVQFS*RHMPLAQFVK---YS 257
H SI T+ F+ K+ + S S ++HSD P Q+ + +K Y
Sbjct: 243 HKSIHTNEKSFECKECGKAFKRSSTLSTHMLIHSDTRPFPCQYCPKRFHQKSDMKKHTYI 302
Query: 256 FTGQGTVGHLSCG 218
TG+ L CG
Sbjct: 303 HTGEKPHKCLECG 315
>SB_27916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 376 SQTQPGSHSSVDCVLHSDNLPSSVQFS*R 290
S T PG S DCVL D L FS R
Sbjct: 32 SPTVPGRPDSTDCVLEKDRLGELKTFSKR 60
>SB_25969| Best HMM Match : fn3 (HMM E-Value=3.1e-13)
Length = 469
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -3
Query: 415 DTHVPFFDLKKPPSQTQPGSHSSVDCVLHSDNLPSSVQFS*RHMPLAQFVKY 260
D HV F + +Q GS DC+++S+ + S +P+ QF +Y
Sbjct: 348 DDHVNSFHNRGTDVNSQSGSTFQADCIIYSEPVDDSAP---GLIPVVQFPEY 396
>SB_19938| Best HMM Match : TolA (HMM E-Value=0.22)
Length = 2279
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 333 KTQSTELCEPGCVCEGGFLRSKNGTCVSIDECHRE 437
KTQS E C + E + K G C SI R+
Sbjct: 1099 KTQSVEECRLASITEVHHFQEKTGACSSIASTDRQ 1133
>SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 818
Score = 27.1 bits (57), Expect = 6.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 207 ELGIPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKT-QSTELCEPGCVCEG 380
E + + C T PCPVN +++ +K ++C G +S +T + + G CEG
Sbjct: 427 EAVLKTEACNTKPCPVNGAWSDFSKWSTCSKSCGG-GIMSRTRTCTNPKPAHGGKECEG 484
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 27.1 bits (57), Expect = 6.8
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 216 IPQDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKL-SECKTQSTELCEPGCVCEGGFLR 392
+P C C N T KG C+Q +C G L S C S + C+ C G LR
Sbjct: 433 VPGGSCKPCSCNNNIDPTVSGKG-CQQCDCCIEGSLRSMCNQVSGKGCQQCDCCIEGSLR 491
Query: 393 S 395
S
Sbjct: 492 S 492
>SB_30304| Best HMM Match : fn3 (HMM E-Value=1.5e-32)
Length = 808
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 421 SIDTHVPFFDLKKPPSQTQPGSHSSVDCVLHSDNLPSS 308
+ID HV F + +Q GS DC+++S+ + S
Sbjct: 617 TIDGHVNIFHNQGTDLNSQSGSTFQADCIIYSEPVDDS 654
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/52 (25%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = +3
Query: 222 QDKCPTVPCPVNEYFTNCAKGMCRQENCTELGKLSECKTQSTEL-CEPGCVC 374
Q CP + C + C G C C L C + T + C C
Sbjct: 69 QKPCPRLKCAASTCNQRCLSGGCTDVACNSHTCLQTCTSNCTNMECHSNTKC 120
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 27.1 bits (57), Expect = 6.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 366 CVCEGGFLRSKNGTCVSIDEC 428
C C G+ R+ G C ++EC
Sbjct: 27 CQCAEGYERNSQGKCADVNEC 47
>SB_16712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 529
Score = 27.1 bits (57), Expect = 6.8
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = -3
Query: 427 HSSIDTHVPFFDLKKPPSQTQPGSHSSVDCVLHSDNLPSSVQFS*RHMPLAQFVKYSFTG 248
+ S +T + DL + Q GS V CVLH+ + Q + R F + S +G
Sbjct: 248 YMSCETVISLLDLVQFCDQ-HSGSQQRVKCVLHAHTRTCANQRTSRQKLKPSFQRRSLSG 306
Query: 247 QGTVGHLSCGIPSSIFVSQISYFAG 173
HL+ I + V+QI + AG
Sbjct: 307 LRHRIHLN--ICVVLAVAQIVFLAG 329
>SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09)
Length = 868
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +2
Query: 8 VVLAFVNIIVLCTATCPENEERTCLQGLCRPQKCIEKNDIIFCQLVDEEKCEYGCACKIG 187
V+ NI++ C +E C + R KC+EK + ++ D + + C K+G
Sbjct: 726 VIFLGANIVLSCQC----DEPALCARAYVRSSKCLEKANQSLDEVSDGARAQ--CLSKLG 779
Query: 188 YLRDENGTWYTARQVSNCAL 247
G + Q+ N AL
Sbjct: 780 RCSVRCGDKHKGFQLINEAL 799
>SB_1668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 26.6 bits (56), Expect = 8.9
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 305 AVLLTTHALSAVREVFIHWTRHSWTLVLRYT-KFHFRLSDILFCRHIHIRTSPHQLIG 135
A L A + + +V H R+ + R T KFH RL + RHI TS H G
Sbjct: 29 AHLSVPQATTFLYDVTAHLCRYVAAHLCRSTYKFHKRLHSYMTSRHICAVTSRHICFG 86
>SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11)
Length = 1461
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 270 NCAKGMCRQENCTELGKLSECKTQ-STELCE 359
NC KG R E C +CK + T +C+
Sbjct: 288 NCTKGKHRAEECKSKSNCFKCKQRHDTSICD 318
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 26.6 bits (56), Expect = 8.9
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +3
Query: 276 AKGMCRQ-ENCTELGKLSECKTQSTELCEPGCV--CEGGFLRSKNGTCVSIDEC 428
A G CR + C + K + + C+ C GF R+ G CV ID C
Sbjct: 244 AGGQCRDIDECRVNASVCGPKQCANTMGGYKCLDSCSLGFKRTLEGACVGIDGC 297
>SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1120
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +2
Query: 32 IVLC-TATCPENEERTCLQ---GLCRPQKCIEKNDIIFC 136
++LC TATCP E+ +C G C+P+ + N + C
Sbjct: 133 VMLCKTATCPGYEKASCRVNPCGACKPEFLDQYNRPVKC 171
>SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 270 NCAKGMCRQENCTELGKLSECKTQ-STELCE 359
NC KG R E C +CK + T +C+
Sbjct: 248 NCTKGKYRAEECKSKSNCFKCKQRHHTSICD 278
>SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 26.6 bits (56), Expect = 8.9
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Frame = +2
Query: 89 LCRPQKCIEK-NDIIFCQLVDEEKCE-----------YGCACKIGYLRDENGTWYTARQV 232
LCRP EK +DI C + + C+ Y C CK GY D T +
Sbjct: 150 LCRPGFEGEKCSDIDECAVSGDSPCDKNAECNNTVGSYTCTCKPGYTGDRK----TCNDI 205
Query: 233 SNCALSSE 256
CA+S +
Sbjct: 206 DECAISGD 213
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,897,209
Number of Sequences: 59808
Number of extensions: 343656
Number of successful extensions: 1252
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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