BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0310 (554 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 75 7e-15 SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|... 73 2e-14 SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.15 SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 30 0.26 SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 30 0.26 SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.80 SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 28 0.80 SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 1.4 SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 27 1.4 SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 27 1.9 SPBC405.02c ||SPBC4C3.01|sequence orphan|Schizosaccharomyces pom... 27 1.9 SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 27 1.9 SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 27 2.5 SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 27 2.5 SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 27 2.5 SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 27 2.5 SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 26 3.2 SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 25 5.7 SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 5.7 SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 25 5.7 SPAC607.09c |btn1||battenin CLN3 family protein|Schizosaccharomy... 25 7.5 SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 7.5 SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 7.5 SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 7.5 SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 25 7.5 SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation... 25 7.5 SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 25 7.5 SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 25 7.5 SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 25 7.5 SPAPB1A10.07c |||sphingolipid biosynthesis protein|Schizosacchar... 25 9.9 >SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr 2|||Manual Length = 539 Score = 74.9 bits (176), Expect = 7e-15 Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 9/129 (6%) Frame = +3 Query: 189 MATDQAKNRMHVFKNAGK-DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTD--- 356 M + +R FK+ G DE+RR+R E +E+RK KREE+L KRRN+ D Sbjct: 1 MESRYLSDRRSRFKSKGVFKADELRRQREEQQIEIRKQKREESLNKRRNLNAVLQNDIDV 60 Query: 357 EEEIDKNLATTD---LDELVMNAAN--AENPEAQLAAVQQCRKLLSCDKNPPIDELIAAG 521 EEE D++ + DE A+ +++ E QL AV + RK LS + +PPID++IA G Sbjct: 61 EEEADQSQVQMEQQMKDEFPKLTADVMSDDIELQLGAVTKFRKYLSKETHPPIDQVIACG 120 Query: 522 ILPILVQCL 548 ++ VQ L Sbjct: 121 VVDRFVQFL 129 >SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|chr 3|||Manual Length = 542 Score = 73.3 bits (172), Expect = 2e-14 Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 7/122 (5%) Frame = +3 Query: 207 KNRMHVFKNAGK-DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEID-KNL 380 ++R +K G DE+RRRR +E+RK KREE L KRRN+ EE I + Sbjct: 10 EHRRQNYKGKGTFQADELRRRRETQQIEIRKQKREENLNKRRNLVDVQEPAEETIPLEQD 69 Query: 381 ATTDLD-EL----VMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQC 545 DL+ EL ++ A +++ EAQ+ A + RK LS + NPPI ++I AG++P V+ Sbjct: 70 KENDLELELQLPDLLKALYSDDIEAQIQATAKFRKALSKETNPPIQKVIDAGVVPRFVEF 129 Query: 546 LS 551 LS Sbjct: 130 LS 131 >SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1236 Score = 30.7 bits (66), Expect = 0.15 Identities = 20/58 (34%), Positives = 36/58 (62%) Frame = -2 Query: 526 SIPAAMSSSIGGFLSHESSFLHCCTAANCASGFSALAAFITSSSRSVVARFLSISSSS 353 SIP + SS ++ SS + ++++ S FS++++ ++SS+ S + LSISSSS Sbjct: 544 SIPTSSSSDFSSSITTISSGI---SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSS 598 >SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|||Manual Length = 612 Score = 29.9 bits (64), Expect = 0.26 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +3 Query: 252 EMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDEL-VMNAANAE 428 E++ R ++ E K ++ + Q+RR + S E DKN++ DLDE +++ A Sbjct: 51 ELKIRVAQLERERAKLEQSLSFQQRRAEMLEKSLRELRKDKNISVKDLDEFHLLDKPAAN 110 Query: 429 NPEAQLAA 452 N +A A Sbjct: 111 NTKADAEA 118 >SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 649 Score = 29.9 bits (64), Expect = 0.26 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 9/82 (10%) Frame = +3 Query: 171 TASTDKMATDQ--AKNRMHVFKN-AGKDVDE---MRRR---RNEVTVELRKNKREETLQK 323 TAS ++ D +NR +N +G V+E + R+ R + ++ ++N+ T+QK Sbjct: 261 TASLEEYLNDPDFEENRKQYLQNKSGSPVEETAILNRKPTLRKKKSIPKKQNESSSTIQK 320 Query: 324 RRNVPISYSTDEEEIDKNLATT 389 V S+ EEE K+L T Sbjct: 321 ENTVQQEASSSEEEAVKSLPET 342 >SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 534 Score = 28.3 bits (60), Expect = 0.80 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = -2 Query: 526 SIPAAMSSSIGGFLSHESSFLHCCTAANCASGFSALAAFITSSSRSVVARFLSISSSS 353 S P + SS+I S SSF ++++ +S S+ ++ TSSS ++ + S SSSS Sbjct: 298 SSPTSTSSTISSSSSSSSSFSSTLSSSSMSSS-SSFSSSPTSSSSTISSSSSSPSSSS 354 Score = 25.8 bits (54), Expect = 4.3 Identities = 21/58 (36%), Positives = 31/58 (53%) Frame = -2 Query: 526 SIPAAMSSSIGGFLSHESSFLHCCTAANCASGFSALAAFITSSSRSVVARFLSISSSS 353 SIP+ SSS S SS + A+ +S S++ + +SSS S + +ISSSS Sbjct: 239 SIPSTSSSSSSTSSSLSSS--SSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSS 294 Score = 25.4 bits (53), Expect = 5.7 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = -2 Query: 526 SIPAAMSSSIGGFLSHESSFLHCCTAANCASGFSALAAFITSSSRSVVARFLSISSSS 353 S P + SS+I S SS T ++ S S+ ++ ++SSS + + S SSSS Sbjct: 334 SSPTSSSSTISSSSSSPSSSSFSSTTSSSKSS-SSFSSTVSSSSSTSSSTLTSSSSSS 390 Score = 25.4 bits (53), Expect = 5.7 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = -2 Query: 526 SIPAAMSSSIGGFLSHESSFLHCCTAANCASGFSALAAFITSSSRSVVARFLSISSSSV 350 S PA+ SS SH+SS ++A +S F + SSS S S+SS + Sbjct: 391 SRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSKPI 449 >SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase Fab1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1932 Score = 28.3 bits (60), Expect = 0.80 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -1 Query: 236 CILEHMHAVFRLISRHFICARCLDTVRGNYTKKQRINIKLLSSK 105 C+ E +FRL +C C + NY++ Q N L SK Sbjct: 93 CLKEAPGFIFRLQGSIKVCRPCASILVNNYSRSQLFNHSLNESK 136 >SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 682 Score = 27.5 bits (58), Expect = 1.4 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = +3 Query: 204 AKNRMHVFKNAGKDVDEMRR--RRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 365 A M V +G DVD ++E T+E K K E Q+R+ + T ++E Sbjct: 447 ANGEMEVTFTSGFDVDNNANSSEKDETTIEKYKRKAAERKQRRKELRQLKKTKDDE 502 >SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosaccharomyces pombe|chr 2|||Manual Length = 376 Score = 27.5 bits (58), Expect = 1.4 Identities = 12/41 (29%), Positives = 27/41 (65%) Frame = +3 Query: 207 KNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 329 ++R+ ++ K++DE RR++ E+ +E ++ E+ L+K R Sbjct: 294 ESRLQKMQDNAKELDESRRKKIEL-LEKKERDEEQFLEKER 333 >SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21|Schizosaccharomyces pombe|chr 3|||Manual Length = 911 Score = 27.1 bits (57), Expect = 1.9 Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = +3 Query: 126 VDSLFLCVITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRK-NK 302 V SLF + ++ ++ TD + + ++A +DE+R+ +E ++++ +K Sbjct: 430 VKSLFKTYVDVVHIKKQDKRRLGTDPSTLESDIAEDAALQIDEVRKISDEEVEKIQQVSK 489 Query: 303 REE--TLQKRRNVPISYSTDE 359 R++ + R P Y D+ Sbjct: 490 RDDIYDILSRSLAPSIYEMDD 510 >SPBC405.02c ||SPBC4C3.01|sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 447 Score = 27.1 bits (57), Expect = 1.9 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Frame = +1 Query: 130 ILCFFV*LPRT-VSRQRAQ-IKWRLIKRKTACM 222 IL F+ +PRT + + R + + WR+I R AC+ Sbjct: 400 ILASFLPIPRTKIHQMRVKHVHWRIINRVVACL 432 >SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 714 Score = 27.1 bits (57), Expect = 1.9 Identities = 23/129 (17%), Positives = 57/129 (44%), Gaps = 2/129 (1%) Frame = +3 Query: 168 ETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISY 347 +TAS++K + + ++ + F N K + + ++N+ + R + +S Sbjct: 102 QTASSNKTFSKRKRSSENSFNNRNKAKSSETSDSSNTSQSFKENRALKDTATSRPLALSS 161 Query: 348 STDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLS--CDKNPPIDELIAAG 521 T ++ +K A ++ + + N++ ++ ++ K +S + ++ IA G Sbjct: 162 DTSYQKSEK--AKSEKSPFLSTSKNSDANYSKTTNQKEAEKAVSQLFEVGVRFNDFIAEG 219 Query: 522 ILPILVQCL 548 I P +V L Sbjct: 220 IEPSVVHTL 228 >SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 642 Score = 26.6 bits (56), Expect = 2.5 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 2/89 (2%) Frame = +3 Query: 177 STDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQ--KRRNVPISYS 350 ST+ D + N+ K VD ++ + T ++ + Q K+++ ++ S Sbjct: 9 STEVKKKDGSMNKRVKVAKLPKKVDSFSPKKKKNTTSSGSSESDSMSQNDKKKDSSLNES 68 Query: 351 TDEEEIDKNLATTDLDELVMNAANAENPE 437 DE+ + ++ DEL + AEN E Sbjct: 69 EDEDFAGFGESASENDELESAESEAENDE 97 >SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 578 Score = 26.6 bits (56), Expect = 2.5 Identities = 11/50 (22%), Positives = 27/50 (54%) Frame = +3 Query: 252 EMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDE 401 E++R++++ E K KR++ L+ + + DE++ ++ D D+ Sbjct: 5 ELKRKKHQSGNEEVKEKRQKPLKNDKKIAEELPQDEDDYEQEEENEDADQ 54 >SPCC417.08 |tef3||translation elongation factor eEF3|Schizosaccharomyces pombe|chr 3|||Manual Length = 1047 Score = 26.6 bits (56), Expect = 2.5 Identities = 11/48 (22%), Positives = 23/48 (47%) Frame = +3 Query: 201 QAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPIS 344 Q K F G +++ ++ + ELRK K+E +++ + +S Sbjct: 996 QEKEEGDTFDAFGNKIEKAKKAKKLTGAELRKKKKERMARRKAGLEVS 1043 >SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr 1|||Manual Length = 513 Score = 26.6 bits (56), Expect = 2.5 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -1 Query: 428 FCVGSVHHQLIKVGGSEVLVDLLLI 354 +C G H ++ +GGS V +DL+ I Sbjct: 263 YCTGDGHKMVMSIGGSTVDLDLVQI 287 >SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosaccharomyces pombe|chr 2|||Manual Length = 593 Score = 26.2 bits (55), Expect = 3.2 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 10/99 (10%) Frame = +3 Query: 261 RRRNEVTVELRKNKREETLQKRRNVPISYSTDEE-------EIDKNLATTDLDELVMNAA 419 R+R++ ++KN R+++ Q++RN+ ++EE EID + + + Sbjct: 113 RKRSDKLKTMKKN-RKQSFQRKRNILEDGKSEEEKFPMKCDEIDPYSRQAIVIRYISDEV 171 Query: 420 NAENPEA-QLAAVQQCRKLLSCDK--NPPIDELIAAGIL 527 EN Q+ + Q KL+ K P +D + GI+ Sbjct: 172 AKENIGGNQVYLIHQLLKLVRAPKFEAPEVDNYVVMGIV 210 >SPCC1827.04 |||ankyrin repeat protein, unknown biological role|Schizosaccharomyces pombe|chr 3|||Manual Length = 600 Score = 25.4 bits (53), Expect = 5.7 Identities = 11/39 (28%), Positives = 25/39 (64%) Frame = +3 Query: 219 HVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV 335 HV + K +E R+R+ E+ E+R+++ +E +K++ + Sbjct: 352 HVDSISIKAQEEERKRQAEIEKEIRQSRLQEEERKKKKL 390 >SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 351 Score = 25.4 bits (53), Expect = 5.7 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = +3 Query: 279 TVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 380 T+E KN +T + ++ +SY D + +DK + Sbjct: 137 TLETEKNLNSKTSESLKSPTLSYPFDLDSLDKRI 170 >SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |Schizosaccharomyces pombe|chr 1|||Manual Length = 362 Score = 25.4 bits (53), Expect = 5.7 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +3 Query: 345 YSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDEL 509 +S+DEEE+D T+ +E N A E + +Q + + +K P DE+ Sbjct: 146 FSSDEEEMDDISVTSSEEEEEENGARIEELNSDEEDAEQAEEEI-LEKPVPKDEV 199 >SPAC607.09c |btn1||battenin CLN3 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 396 Score = 25.0 bits (52), Expect = 7.5 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 Query: 85 RKTCLISLLLSNFMLILCFFV*LPRTVS 168 R T +IS L F+LI+ FFV LP + S Sbjct: 159 RSTLIISSFLPLFLLIMYFFV-LPESES 185 >SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces pombe|chr 1|||Manual Length = 542 Score = 25.0 bits (52), Expect = 7.5 Identities = 7/17 (41%), Positives = 14/17 (82%) Frame = +3 Query: 327 RNVPISYSTDEEEIDKN 377 R +P+ YST++EE+ ++ Sbjct: 188 RQIPVGYSTNDEEVTRD 204 >SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1727 Score = 25.0 bits (52), Expect = 7.5 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 1/87 (1%) Frame = +3 Query: 240 KDVDEMRRRRNEVTVELRKNKREETLQK-RRNVPISYSTDEEEIDKNLATTDLDELVMNA 416 K +D +R+ E+ +L+ + E+ L + R + S D I A+ + D N Sbjct: 1625 KQLDNIRKEL-EMRNKLKLSMLEKNLARVRAELEQSKKKDSPAILSLEASKNTDS---NK 1680 Query: 417 ANAENPEAQLAAVQQCRKLLSCDKNPP 497 +N+E P AQ+ + K S D N P Sbjct: 1681 SNSEVPAAQVKEKKLIAKTHSVDTNSP 1707 >SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual Length = 738 Score = 25.0 bits (52), Expect = 7.5 Identities = 7/22 (31%), Positives = 17/22 (77%) Frame = -1 Query: 182 CARCLDTVRGNYTKKQRINIKL 117 CAR L+ +GN+ + Q++++++ Sbjct: 410 CARALNAEQGNFVRGQKLHLEI 431 >SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces pombe|chr 1|||Manual Length = 844 Score = 25.0 bits (52), Expect = 7.5 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +3 Query: 246 VDEMRRRRNEVTVELRKNKREETLQ-KRRNVPISYSTDEEEIDKNLATTDLDELVMNA 416 ++E+R+R ++ N + KRRN+ ST + + N + +DE ++ A Sbjct: 114 LEEIRKRNQSRKNQMSNNSTTYHRETKRRNINAEASTSDNCNNSNTSVDPMDEYLVTA 171 >SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation specificity factor complex subunit Pta1|Schizosaccharomyces pombe|chr 1|||Manual Length = 670 Score = 25.0 bits (52), Expect = 7.5 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -2 Query: 469 FLHCCTAANCASGFSAL 419 FLHCCT+ N +S + L Sbjct: 105 FLHCCTSPNDSSTWDTL 121 >SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component |Schizosaccharomyces pombe|chr 3|||Manual Length = 809 Score = 25.0 bits (52), Expect = 7.5 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +3 Query: 306 EETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPE 437 E + +K+ NV S S+ + + + DL EL+ + A +NP+ Sbjct: 375 ERSKEKKANVIESLSSAMDAVLATSSLDDLAELIASFAGNKNPQ 418 >SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual Length = 233 Score = 25.0 bits (52), Expect = 7.5 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +3 Query: 228 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 329 K D + R+ + + +R+ +REE L+KRR Sbjct: 180 KKKSSDAWKERKDNEKKAMLMRQQRREENLKKRR 213 >SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosaccharomyces pombe|chr 2|||Manual Length = 346 Score = 25.0 bits (52), Expect = 7.5 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 1/88 (1%) Frame = +3 Query: 144 CVITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRR-RNEVTVELRKNKREETLQ 320 C IT +E S +MA A ++ F N K D ++ + +N+ ++ Sbjct: 106 CCITYSKIENLSNTRMARLTAPSKGPSFSNLNKPNDLLKAEIEDNEASHYSQNQSSDSDS 165 Query: 321 KRRNVPISYSTDEEEIDKNLATTDLDEL 404 +S + +E+ K L +EL Sbjct: 166 DEAPEEVSLKSSSDEVKKRLQRLKGNEL 193 >SPAPB1A10.07c |||sphingolipid biosynthesis protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 441 Score = 24.6 bits (51), Expect = 9.9 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -2 Query: 526 SIPAAMSSSIGGFLSHESSFL 464 SIP A++SS+ G + SSFL Sbjct: 6 SIPLALASSLSGVVGIASSFL 26 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,301,140 Number of Sequences: 5004 Number of extensions: 46267 Number of successful extensions: 232 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 192 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 226 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 231978230 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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