Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0309
(597 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB037824-1|BAA92641.1| 1337|Homo sapiens KIAA1403 protein protein. 34 0.33
AK131247-1|BAD18427.1| 148|Homo sapiens protein ( Homo sapiens ... 32 1.8
BC027925-1|AAH27925.1| 360|Homo sapiens doublecortex; lissencep... 31 4.1
AJ005592-1|CAA06617.1| 360|Homo sapiens doublecortin protein. 31 4.1
AJ003112-1|CAA05867.1| 360|Homo sapiens doublecortin protein. 31 4.1
AF040255-1|AAC31696.1| 360|Homo sapiens doublecortin protein. 31 4.1
AF034634-1|AAC52037.1| 360|Homo sapiens doublecortin protein. 31 4.1
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 30 7.2
AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein. 30 7.2
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 29 9.5
BC150273-1|AAI50274.1| 1422|Homo sapiens YEATS domain containing... 29 9.5
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 29 9.5
AB033023-1|BAA86511.1| 1487|Homo sapiens KIAA1197 protein protein. 29 9.5
>AB037824-1|BAA92641.1| 1337|Homo sapiens KIAA1403 protein protein.
Length = 1337
Score = 34.3 bits (75), Expect = 0.33
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 426 APSLPWTLSPSPARKTACKSPLHWRNGTPKSIASTTYSMGSSTLLDLGAIRAVSEN 593
A SLP T S +T CK LHW +G S+ + SS+ L LGA+R + E+
Sbjct: 1280 ALSLPLTQVLSQPSRT-CKGTLHWASGAVLSLEELWKTSASSSYL-LGALRGLRES 1333
>AK131247-1|BAD18427.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ16171 fis, clone BRHIP2003272. ).
Length = 148
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 423 PAP-SLPWTLSPSPARKTACKSPLHWRNGTPKSIASTTYSMGSSTLLDLGAI 575
P+P S PWT R CK H+ + P+S + + S+++LDL ++
Sbjct: 24 PSPLSPPWTHCAQHLRPCTCKGSSHYGDQQPRSQVLNSKMLLSASVLDLSSV 75
>BC027925-1|AAH27925.1| 360|Homo sapiens doublecortex;
lissencephaly, X-linked (doublecortin) protein.
Length = 360
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 411 PRRGPAPSLPWTLSPSPARKTACKSPLHWRNGTPKSIASTTYSMGS--STLLDLGAIR 578
P+ P P SP P R++ KSP NGT S ST S S ST G++R
Sbjct: 284 PKASPTPQKTSAKSPGPMRRS--KSPADSANGTSSSQLSTPKSKQSPISTPTSPGSLR 339
>AJ005592-1|CAA06617.1| 360|Homo sapiens doublecortin protein.
Length = 360
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 411 PRRGPAPSLPWTLSPSPARKTACKSPLHWRNGTPKSIASTTYSMGS--STLLDLGAIR 578
P+ P P SP P R++ KSP NGT S ST S S ST G++R
Sbjct: 284 PKASPTPQKTSAKSPGPMRRS--KSPADSANGTSSSQLSTPKSKQSPISTPTSPGSLR 339
>AJ003112-1|CAA05867.1| 360|Homo sapiens doublecortin protein.
Length = 360
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 411 PRRGPAPSLPWTLSPSPARKTACKSPLHWRNGTPKSIASTTYSMGS--STLLDLGAIR 578
P+ P P SP P R++ KSP NGT S ST S S ST G++R
Sbjct: 284 PKASPTPQKTSAKSPGPMRRS--KSPADSANGTSSSQLSTPKSKQSPISTPTSPGSLR 339
>AF040255-1|AAC31696.1| 360|Homo sapiens doublecortin protein.
Length = 360
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 411 PRRGPAPSLPWTLSPSPARKTACKSPLHWRNGTPKSIASTTYSMGS--STLLDLGAIR 578
P+ P P SP P R++ KSP NGT S ST S S ST G++R
Sbjct: 284 PKASPTPQKTSAKSPGPMRRS--KSPADSANGTSSSQLSTPKSKQSPISTPTSPGSLR 339
>AF034634-1|AAC52037.1| 360|Homo sapiens doublecortin protein.
Length = 360
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 411 PRRGPAPSLPWTLSPSPARKTACKSPLHWRNGTPKSIASTTYSMGS--STLLDLGAIR 578
P+ P P SP P R++ KSP NGT S ST S S ST G++R
Sbjct: 284 PKASPTPQKTSAKSPGPMRRS--KSPADSANGTSSSQLSTPKSKQSPISTPTSPGSLR 339
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 29.9 bits (64), Expect = 7.2
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 399 PSQIPRRGPAPSLPWTLSPS---PARKTACKSPLHWRNGTPKSIASTTYSMGSST 554
PS P P PSL + P+ P + TA + W + +S A+ T GSS+
Sbjct: 110 PSPAPGTSPQPSLSASTEPAVPTPTQTTATEKTTLWVTPSIRSTAALTSQTGSSS 164
>AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein.
Length = 1594
Score = 29.9 bits (64), Expect = 7.2
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 399 PSQIPRRGPAPSLPWTLSPS---PARKTACKSPLHWRNGTPKSIASTTYSMGSST 554
PS P P PSL + P+ P + TA + W + +S A+ T GSS+
Sbjct: 1435 PSPAPGTSPQPSLSASTEPAVPTPTQTTATEKTTLWVTPSIRSTAALTSQTGSSS 1489
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 399 PSQIPRRGPAPSLPWTLSPSPARKTACKSPLHWRNGTPKSIASTT 533
P+ + PAP+ P +P+ ++TA +P TP+ +A TT
Sbjct: 592 PAPTTTKKPAPTAPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTT 636
>BC150273-1|AAI50274.1| 1422|Homo sapiens YEATS domain containing 2
protein.
Length = 1422
Score = 29.5 bits (63), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 444 TLSPSPARKTACKSPLHWRNGTPKSIASTTY 536
T SPSP +T +P+H + GT S+ + Y
Sbjct: 469 TPSPSPLPRTPTSTPVHVKQGTAGSVINNPY 499
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 399 PSQIPRRGPAPSLPWTLSPSPARKTACKSPLHWRNGTPKSIASTT 533
P+ + PAP+ P +P+ ++TA +P TP+ +A TT
Sbjct: 592 PAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTT 636
>AB033023-1|BAA86511.1| 1487|Homo sapiens KIAA1197 protein protein.
Length = 1487
Score = 29.5 bits (63), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 444 TLSPSPARKTACKSPLHWRNGTPKSIASTTY 536
T SPSP +T +P+H + GT S+ + Y
Sbjct: 534 TPSPSPLPRTPTSTPVHVKQGTAGSVINNPY 564
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,605,224
Number of Sequences: 237096
Number of extensions: 1950315
Number of successful extensions: 5586
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5563
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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