Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0308
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 179 1e-45
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 179 1e-45
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 179 1e-45
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 179 1e-45
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 175 2e-44
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 175 2e-44
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 175 2e-44
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 175 2e-44
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 171 3e-43
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 171 3e-43
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 169 2e-42
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 168 3e-42
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 165 3e-41
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 157 5e-39
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 157 5e-39
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 92 4e-19
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 91 6e-19
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 89 2e-18
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 89 2e-18
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 81 7e-16
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 81 7e-16
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 38 0.006
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 38 0.006
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.40
U80437-7|AAB37622.2| 295|Caenorhabditis elegans Nudix family pr... 30 1.6
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 29 3.7
U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical p... 28 4.9
U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical p... 28 4.9
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 28 4.9
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 28 4.9
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 4.9
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 6.5
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 6.5
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 6.5
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 6.5
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 6.5
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 6.5
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 6.5
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 6.5
AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical ... 27 8.6
AF273832-1|AAG15180.1| 408|Caenorhabditis elegans nuclear recep... 27 8.6
AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear recep... 27 8.6
AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear recep... 27 8.6
AF022984-9|AAB69950.2| 393|Caenorhabditis elegans Nuclear hormo... 27 8.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 179 bits (436), Expect = 1e-45
Identities = 83/106 (78%), Positives = 89/106 (83%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRI
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 122
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLE
Sbjct: 123 RRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Score = 132 bits (320), Expect = 2e-31
Identities = 54/67 (80%), Positives = 63/67 (94%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 315 HVPRCCL 335
HVPR +
Sbjct: 61 HVPRAVM 67
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 179 bits (436), Expect = 1e-45
Identities = 83/106 (78%), Positives = 89/106 (83%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRI
Sbjct: 62 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 121
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLE
Sbjct: 122 RRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 167
Score = 130 bits (315), Expect = 6e-31
Identities = 53/66 (80%), Positives = 62/66 (93%)
Frame = +3
Query: 138 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 317
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 318 VPRCCL 335
VPR +
Sbjct: 61 VPRAVM 66
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 179 bits (436), Expect = 1e-45
Identities = 83/106 (78%), Positives = 89/106 (83%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRI
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 122
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLE
Sbjct: 123 RRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Score = 132 bits (320), Expect = 2e-31
Identities = 54/67 (80%), Positives = 63/67 (94%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 315 HVPRCCL 335
HVPR +
Sbjct: 61 HVPRAVM 67
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 179 bits (436), Expect = 1e-45
Identities = 83/106 (78%), Positives = 89/106 (83%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRI
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 122
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLE
Sbjct: 123 RRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Score = 132 bits (320), Expect = 2e-31
Identities = 54/67 (80%), Positives = 63/67 (94%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 315 HVPRCCL 335
HVPR +
Sbjct: 61 HVPRAVM 67
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 175 bits (426), Expect = 2e-44
Identities = 78/106 (73%), Positives = 90/106 (84%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P ++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LAD C+GLQGF +FH LLMERLSVDYGKKSKLE
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Score = 110 bits (265), Expect = 7e-25
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 315 HVPR 326
+VPR
Sbjct: 59 YVPR 62
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 175 bits (426), Expect = 2e-44
Identities = 78/106 (73%), Positives = 90/106 (84%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P ++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LAD C+GLQGF +FH LLMERLSVDYGKKSKLE
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Score = 109 bits (262), Expect = 2e-24
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 315 HVPR 326
+VPR
Sbjct: 59 YVPR 62
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 175 bits (426), Expect = 2e-44
Identities = 78/106 (73%), Positives = 90/106 (84%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P ++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LAD C+GLQGF +FH LLMERLSVDYGKKSKLE
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Score = 109 bits (262), Expect = 2e-24
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 315 HVPR 326
+VPR
Sbjct: 59 YVPR 62
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 175 bits (426), Expect = 2e-44
Identities = 78/106 (73%), Positives = 90/106 (84%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P ++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LAD C+GLQGF +FH LLMERLSVDYGKKSKLE
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Score = 110 bits (265), Expect = 7e-25
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 315 HVPR 326
+VPR
Sbjct: 59 YVPR 62
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 171 bits (417), Expect = 3e-43
Identities = 76/106 (71%), Positives = 88/106 (83%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P ++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LAD C+GLQGF +FH LLMERLSVDYGKKSKLE
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Score = 108 bits (259), Expect = 4e-24
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 315 HVPR 326
+VPR
Sbjct: 59 YVPR 62
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 171 bits (417), Expect = 3e-43
Identities = 76/106 (71%), Positives = 88/106 (83%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P ++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LAD C+GLQGF +FH LLMERLSVDYGKKSKLE
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Score = 108 bits (259), Expect = 4e-24
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 315 HVPR 326
+VPR
Sbjct: 59 YVPR 62
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 169 bits (410), Expect = 2e-42
Identities = 75/106 (70%), Positives = 87/106 (82%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P A+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+DR+
Sbjct: 68 PRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRV 127
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+L + C GLQGFL+FH LLMERLSVDYGKKSKLE
Sbjct: 128 RRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLE 173
Score = 115 bits (276), Expect = 3e-26
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +3
Query: 132 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 311
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 312 KHVPRCCL 335
KHVPR +
Sbjct: 65 KHVPRAIM 72
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 168 bits (408), Expect = 3e-42
Identities = 81/133 (60%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Frame = +1
Query: 244 PQTRPSGVET-ILSTLSSARPELASTYPGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 420
P GVE +T S P P A+FVDLEPTV+DEVRTGTY +LFHPEQLI+G
Sbjct: 37 PDDTSYGVEDQSYNTFFSETPS-GKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISG 95
Query: 421 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 600
KEDAANNYARGHYTIGKE++D+V+DR+R+L ++C LQGFLIFH L+ME
Sbjct: 96 KEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVME 155
Query: 601 RLSVDYGKKSKLE 639
RLS+DYGKK+KLE
Sbjct: 156 RLSIDYGKKAKLE 168
Score = 114 bits (274), Expect = 6e-26
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 315 HVPR 326
HVPR
Sbjct: 61 HVPR 64
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 165 bits (400), Expect = 3e-41
Identities = 72/106 (67%), Positives = 86/106 (81%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P ++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LDRI
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
R+LA+ C GLQGF +FH +LMERLS +YGKKSKLE
Sbjct: 120 RRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLE 165
Score = 97.9 bits (233), Expect = 5e-21
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 315 HVPR 326
HVPR
Sbjct: 58 HVPR 61
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 159 bits (386), Expect = 2e-39
Identities = 71/106 (66%), Positives = 84/106 (79%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P A++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDRI
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
RK + C GLQGFL+FH LLMERLSV++GKKSKLE
Sbjct: 126 RKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLE 171
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = +3
Query: 138 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 317
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 318 VPR 326
VPR
Sbjct: 65 VPR 67
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 157 bits (382), Expect = 5e-39
Identities = 71/106 (66%), Positives = 85/106 (80%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+
Sbjct: 69 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 128
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
++LA+ C GLQGF+IFH LLMERLS +YGKK KLE
Sbjct: 129 KRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLE 174
Score = 105 bits (252), Expect = 3e-23
Identities = 45/64 (70%), Positives = 50/64 (78%)
Frame = +3
Query: 138 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 317
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 318 VPRC 329
VPRC
Sbjct: 68 VPRC 71
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 157 bits (382), Expect = 5e-39
Identities = 71/106 (66%), Positives = 85/106 (80%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+
Sbjct: 41 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 100
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 639
++LA+ C GLQGF+IFH LLMERLS +YGKK KLE
Sbjct: 101 KRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLE 146
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +3
Query: 201 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRC 329
++CLEHGIQPDG D T ++ NTFF+ET GKHVPRC
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRC 43
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 93.5 bits (222), Expect = 1e-19
Identities = 45/99 (45%), Positives = 60/99 (60%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD I
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 618
RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 59 YVPRAVL 65
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 93.1 bits (221), Expect = 2e-19
Identities = 44/99 (44%), Positives = 60/99 (60%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 618
RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
Score = 57.2 bits (132), Expect = 9e-09
Identities = 28/67 (41%), Positives = 37/67 (55%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 59 YVPRAVL 65
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 91.9 bits (218), Expect = 4e-19
Identities = 44/99 (44%), Positives = 60/99 (60%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD I
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 618
RK A+ C LQGF + H LL+ ++ ++
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEF 159
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 59 YVPRAVL 65
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 91.1 bits (216), Expect = 6e-19
Identities = 43/99 (43%), Positives = 58/99 (58%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P A VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 618
RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEY 159
Score = 57.2 bits (132), Expect = 9e-09
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 315 HVPRCCL 335
+VPR CL
Sbjct: 59 YVPRACL 65
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 89.4 bits (212), Expect = 2e-18
Identities = 43/99 (43%), Positives = 59/99 (59%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 618
RK A+ LQGF + H LL+ ++ +Y
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 59 YVPRAVL 65
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 89.4 bits (212), Expect = 2e-18
Identities = 43/99 (43%), Positives = 59/99 (59%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 618
RK A+ LQGF + H LL+ ++ +Y
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 59 YVPRAVL 65
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 81.0 bits (191), Expect = 7e-16
Identities = 39/103 (37%), Positives = 59/103 (57%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P A+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL I
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 630
R+ A+ L+GF + H LL+ +L +Y K+
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKT 163
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/67 (40%), Positives = 35/67 (52%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 59 YVPRAIL 65
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 81.0 bits (191), Expect = 7e-16
Identities = 39/103 (37%), Positives = 59/103 (57%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P A+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL I
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKS 630
R+ A+ L+GF + H LL+ +L +Y K+
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKT 163
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/67 (40%), Positives = 35/67 (52%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 59 YVPRAIL 65
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 147 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 326
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 327 CCL 335
L
Sbjct: 65 AVL 67
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 147 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 326
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 327 CCL 335
L
Sbjct: 65 AVL 67
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 163 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 318
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>U80437-7|AAB37622.2| 295|Caenorhabditis elegans Nudix family
protein 7 protein.
Length = 295
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +1
Query: 205 TAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPGAVFVDLEPTVVDEVRTGTY 384
++W +A+S++ C TR + T + P +PG V + + DE R
Sbjct: 8 SSWRSAASIILACKTTRRV-LMLKRGTTAKFMPN-TMVFPGGVVDKTDAKLGDEFRIAAV 65
Query: 385 RQLFHPEQLIT---GKEDAANN 441
R+LF +++ G + +ANN
Sbjct: 66 RELFEESGVLSTKNGWQTSANN 87
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 127 ESKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRP-SGVETILSTLSSARP 303
+S VS S T ++ SRSV P S T S+L++ P ++ SGV T +T ++ P
Sbjct: 40 QSSAVSESQST-SERTSRSVSP-DSTPVRVTTSTLLSTVPTSQDISGVSTAPTTKATLPP 97
Query: 304 ELASTYPGAVFVDLEPTVVDEVRTGT 381
P ++L P + T T
Sbjct: 98 ITYPPAPTTTTINLAPITYPPILTTT 123
>U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical
protein F36D4.5b protein.
Length = 315
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 163 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPG 327
++ +SRS P F W+T + + QT P+G T++ S++ ++ PG
Sbjct: 248 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTPG 301
>U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical
protein F36D4.5a protein.
Length = 334
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 163 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPG 327
++ +SRS P F W+T + + QT P+G T++ S++ ++ PG
Sbjct: 267 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTPG 320
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 91 NLILHLSIEKEVESKC--VSASLYTL-AKPESRSVMPAGSFTAWSTASSLMARCPQTRPS 261
+++L L+ ++E+E C + + L A + S +P S + + P RP+
Sbjct: 295 DILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPN 354
Query: 262 GVETILSTLSSARPELASTYPGAVFV 339
G + +S+ E + T G VFV
Sbjct: 355 GAISRKCVISTNIAETSLTIDGVVFV 380
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 91 NLILHLSIEKEVESKC--VSASLYTL-AKPESRSVMPAGSFTAWSTASSLMARCPQTRPS 261
+++L L+ ++E+E C + + L A + S +P S + + P RP+
Sbjct: 295 DILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPN 354
Query: 262 GVETILSTLSSARPELASTYPGAVFV 339
G + +S+ E + T G VFV
Sbjct: 355 GAISRKCVISTNIAETSLTIDGVVFV 380
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 426 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 331
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 355 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 355 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 355 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 355 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 355 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 355 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 355 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 355 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical
protein H01A20.1 protein.
Length = 463
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 114 RKGSRIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP-TDKT 257
R G R + +AG + +C CLE G++PD P DKT
Sbjct: 82 RAGKNYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AF273832-1|AAG15180.1| 408|Caenorhabditis elegans nuclear receptor
NHR-90 protein.
Length = 408
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 105 FKHRKGSRIKMRECISVHVGQAGVQIGNACWELYCLEHGIQ 227
F+ R G++ +C+SVH G+A + C C E G++
Sbjct: 49 FRRRAGTKYLRLKCLSVHCGEA-ARFCKPCRLKRCYEAGMK 88
>AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 114 RKGSRIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP-TDKT 257
R G R + +AG + +C CLE G++PD P DKT
Sbjct: 82 RAGKNYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 114 RKGSRIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP-TDKT 257
R G R + +AG + +C CLE G++PD P DKT
Sbjct: 82 RAGKNYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AF022984-9|AAB69950.2| 393|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 90 protein.
Length = 393
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 105 FKHRKGSRIKMRECISVHVGQAGVQIGNACWELYCLEHGIQ 227
F+ R G++ +C+SVH G+A + C C E G++
Sbjct: 34 FRRRAGTKYLRLKCLSVHCGEA-ARFCKPCRLKRCYEAGMK 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,506,967
Number of Sequences: 27780
Number of extensions: 339395
Number of successful extensions: 924
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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