Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0308
(640 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 177 5e-45
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 177 5e-45
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 177 5e-45
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 177 5e-45
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 176 9e-45
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 176 9e-45
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 168 2e-42
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 96 2e-20
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 94 6e-20
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 94 6e-20
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 94 8e-20
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 93 2e-19
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 92 3e-19
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 92 3e-19
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 91 6e-19
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 87 9e-18
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 62 2e-10
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 62 3e-10
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.0
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.6
At2g40070.1 68415.m04923 expressed protein 29 3.4
At2g25850.2 68415.m03104 nucleotidyltransferase family protein c... 28 4.5
At2g25850.1 68415.m03103 nucleotidyltransferase family protein c... 28 4.5
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 28 6.0
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 7.9
At3g23590.1 68416.m02967 expressed protein 27 7.9
At3g19180.1 68416.m02435 cell division protein-related weak simi... 27 7.9
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 27 7.9
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 7.9
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 177 bits (431), Expect = 5e-45
Identities = 84/105 (80%), Positives = 90/105 (85%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Score = 142 bits (343), Expect = 2e-34
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 315 HVPR 326
HVPR
Sbjct: 61 HVPR 64
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 177 bits (431), Expect = 5e-45
Identities = 84/105 (80%), Positives = 90/105 (85%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Score = 142 bits (343), Expect = 2e-34
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 315 HVPR 326
HVPR
Sbjct: 61 HVPR 64
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 177 bits (431), Expect = 5e-45
Identities = 84/105 (80%), Positives = 90/105 (85%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Score = 143 bits (346), Expect = 1e-34
Identities = 57/64 (89%), Positives = 64/64 (100%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 315 HVPR 326
HVPR
Sbjct: 61 HVPR 64
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 177 bits (431), Expect = 5e-45
Identities = 84/105 (80%), Positives = 90/105 (85%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRI
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Score = 143 bits (346), Expect = 1e-34
Identities = 57/64 (89%), Positives = 64/64 (100%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 315 HVPR 326
HVPR
Sbjct: 61 HVPR 64
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 176 bits (429), Expect = 9e-45
Identities = 82/105 (78%), Positives = 90/105 (85%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Score = 124 bits (300), Expect = 4e-29
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 315 HVPR 326
HVPR
Sbjct: 61 HVPR 64
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 176 bits (429), Expect = 9e-45
Identities = 82/105 (78%), Positives = 90/105 (85%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Score = 124 bits (300), Expect = 4e-29
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 315 HVPR 326
HVPR
Sbjct: 61 HVPR 64
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 168 bits (409), Expect = 2e-42
Identities = 77/105 (73%), Positives = 89/105 (84%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+
Sbjct: 63 PRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERL 122
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RKLAD CTGLQGFL+F+ LL+ERLSVD+GKKSKL
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKL 167
Score = 119 bits (287), Expect = 1e-27
Identities = 47/64 (73%), Positives = 57/64 (89%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 315 HVPR 326
HVPR
Sbjct: 61 HVPR 64
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 95.9 bits (228), Expect = 2e-20
Identities = 43/105 (40%), Positives = 62/105 (59%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P A+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 305
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 306 AGKHVPRCCL 335
G++VPR L
Sbjct: 56 CGRYVPRAIL 65
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 94.3 bits (224), Expect = 6e-20
Identities = 43/105 (40%), Positives = 62/105 (59%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 315 HVPRCCL 335
VPR L
Sbjct: 59 FVPRAVL 65
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 94.3 bits (224), Expect = 6e-20
Identities = 42/105 (40%), Positives = 62/105 (59%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 62 PRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 121
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 122 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 166
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 60 YVPRAVL 66
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/99 (42%), Positives = 60/99 (60%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 618
RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 59 YVPRAVL 65
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/105 (39%), Positives = 62/105 (59%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 62 PRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 121
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 122 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 166
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 60 YVPRAVL 66
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/105 (40%), Positives = 61/105 (58%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/67 (38%), Positives = 36/67 (53%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 315 HVPRCCL 335
VPR L
Sbjct: 59 FVPRAVL 65
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/105 (40%), Positives = 61/105 (58%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKL 636
RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/67 (38%), Positives = 36/67 (53%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 315 HVPRCCL 335
VPR L
Sbjct: 59 FVPRAVL 65
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/99 (40%), Positives = 60/99 (60%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 618
RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
Score = 55.2 bits (127), Expect = 3e-08
Identities = 28/67 (41%), Positives = 36/67 (53%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 59 YVPRAVL 65
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/99 (39%), Positives = 59/99 (59%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 501
P AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 502 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 618
RK A+ LQGF + H LL+ ++ +Y
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +3
Query: 135 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 314
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 315 HVPRCCL 335
+VPR L
Sbjct: 59 YVPRAVL 65
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLD 495
P A+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMD 120
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 627
I + AD L+GF++ H L+E L+ Y KK
Sbjct: 121 MIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKK 164
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +3
Query: 138 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 317
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 318 VPRCCL 335
+PR L
Sbjct: 61 IPRALL 66
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.1 bits (144), Expect = 3e-10
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +1
Query: 322 PGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLD 495
P A+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMD 120
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 627
I + AD L+GF++ H L+E L+ Y KK
Sbjct: 121 MIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKK 164
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +3
Query: 138 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 317
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 318 VPRCCL 335
+PR L
Sbjct: 61 IPRALL 66
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 573 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 475
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 304 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 179
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 103 HLSIEKEVESKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILS 282
HL+ ++ S +S+S +P S + T +S+L A +RPS T +
Sbjct: 154 HLTSRQQTSSPGLSSSSGASRRPSSSGGPGSRPATPTGRSSTLTANSKSSRPS-TPTSRA 212
Query: 283 TLSSA-RPELAST 318
T+SSA RP L ++
Sbjct: 213 TVSSATRPSLTNS 225
>At2g25850.2 68415.m03104 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain; identical to cDNA GI:31747890
Length = 800
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -1
Query: 238 WPSGWMPCSRQ*SSQQALPIWTPAWPTCTEMHSRILIRLPFLCLNVELNYNQSS 77
WP+ M C+ + + P+W P H +I + C+N N +QS+
Sbjct: 285 WPNPVMLCAIE-EDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQST 337
>At2g25850.1 68415.m03103 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain; identical to cDNA GI:31747890
Length = 787
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -1
Query: 238 WPSGWMPCSRQ*SSQQALPIWTPAWPTCTEMHSRILIRLPFLCLNVELNYNQSS 77
WP+ M C+ + + P+W P H +I + C+N N +QS+
Sbjct: 285 WPNPVMLCAIE-EDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQST 337
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +1
Query: 112 IEKEVESKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLS 291
+ +VE + ++ Y L P + + AS+ +R P + + TI ++S
Sbjct: 827 VTSDVE-RILTKGAYMLFYARCTPTPPRLAVCTKTEASNKKSRVPLPKANEKSTISRSVS 885
Query: 292 SARPELASTYPG 327
++ PEL+S PG
Sbjct: 886 TSSPELSSNTPG 897
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 7.9
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 505 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 416
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At3g23590.1 68416.m02967 expressed protein
Length = 1309
Score = 27.5 bits (58), Expect = 7.9
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 2/104 (1%)
Frame = +1
Query: 133 KCVSASL--YTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 306
+C++A+L T P ++V + T S + S S S+ RPE
Sbjct: 775 RCIAATLSGLTHGSPVHQTVEALLNMTFGKVRGSQTLNPVNSGTSSSSGAASEDSNIRPE 834
Query: 307 LASTYPGAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAAN 438
+P + P VVD T P QL TG +D A+
Sbjct: 835 ----FPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLAD 874
>At3g19180.1 68416.m02435 cell division protein-related weak
similarity to cell division protein Ftn2 [Synechococcus
sp. PCC 7942] GI:16226084
Length = 819
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 118 KEVESKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTR 255
K++ES SA ++ ESRS S AW S++A P TR
Sbjct: 427 KQLESNSDSAVRNSILGKESRSTSATPSLEAWL-MESVLANFPDTR 471
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -3
Query: 323 GYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDSG-LANV 156
G+ + SG + E + ++ D + H A DA+++ T +D G ANV
Sbjct: 754 GWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVGSAANV 813
Query: 155 YRDALTHF 132
YR LTHF
Sbjct: 814 YRIVLTHF 821
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 7.9
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 505 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 416
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,809,421
Number of Sequences: 28952
Number of extensions: 320336
Number of successful extensions: 984
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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