Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0307
(585 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 99 1e-21
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 99 2e-21
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 41 7e-04
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 40 0.001
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 40 0.002
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 40 0.002
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 40 0.002
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 40 0.002
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 40 0.002
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 40 0.002
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 40 0.002
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 40 0.002
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 40 0.002
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 40 0.002
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 40 0.002
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 40 0.002
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 40 0.002
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 40 0.002
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 40 0.002
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 40 0.002
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 40 0.002
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 40 0.002
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 40 0.002
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 40 0.002
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 38 0.005
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 36 0.020
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 30 0.99
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 30 1.3
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 28 5.3
At4g02920.2 68417.m00396 expressed protein 28 5.3
At4g02920.1 68417.m00395 expressed protein 28 5.3
At3g51780.1 68416.m05678 BAG domain-containing protein low simil... 28 5.3
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 28 5.3
At5g62990.1 68418.m07903 hypothetical protein 27 7.0
At1g47330.1 68414.m05240 expressed protein contains Pfam profile... 27 7.0
At5g66020.1 68418.m08313 phosphoinositide phosphatase family pro... 27 9.2
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 99 bits (238), Expect = 1e-21
Identities = 41/78 (52%), Positives = 64/78 (82%)
Frame = +3
Query: 351 DLQARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHML 530
DL+ + QQ+L NP+M+R++++ P +Q +MN+PE MRS+I +NPQM++L+ RNPE+ H+L
Sbjct: 151 DLE-QAQQQLAQNPNMIREMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVL 209
Query: 531 NNPELLRQTMELARNPAM 584
N+P +LRQT+E ARNP +
Sbjct: 210 NDPSILRQTLEAARNPEL 227
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Frame = +3
Query: 384 SNPD--MLRQVLDNPLVQQMM----NDPENMRSLITSNPQMQDLMSRNPEISHMLNNPEL 545
+ PD L Q+L NP + QMM ++P+ M L++ NPQ++ ++ NP++ M+ NP+
Sbjct: 361 ATPDASQLSQILQNPAMSQMMQSVLSNPQYMNQLMSLNPQLRSMLDMNPQLREMMQNPDF 420
Query: 546 LRQ 554
LRQ
Sbjct: 421 LRQ 423
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Frame = +3
Query: 360 ARMQQELLSNP---DMLRQVLDNP-LVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHM 527
A ++L NP M++ VL NP + Q+M+ +RS++ NPQ++++M +NP+
Sbjct: 365 ASQLSQILQNPAMSQMMQSVLSNPQYMNQLMSLNPQLRSMLDMNPQLREMM-QNPDFLRQ 423
Query: 528 LNNPELLRQTMELARN 575
++PE+++Q M L ++
Sbjct: 424 FSSPEMMQQMMSLQQS 439
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +3
Query: 366 MQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITS--NPQMQDLMSRNPE--ISHMLN 533
M+ +++NP M V NP + ++NDP +R + + NP++ M RN + +S++ +
Sbjct: 185 MRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIES 244
Query: 534 NPE---LLRQTMELARNPAM 584
PE +LR+ E + P M
Sbjct: 245 MPEGFNMLRRMYENVQEPLM 264
Score = 31.1 bits (67), Expect = 0.57
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 78 KEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLV 209
KE+++ Q LI+ G+I+ D TL + ++ TVH+V
Sbjct: 44 KELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +3
Query: 342 TFMDLQARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRS 464
+ +D+ +++ E++ NPD LRQ ++QQMM+ +++ S
Sbjct: 403 SMLDMNPQLR-EMMQNPDFLRQFSSPEMMQQMMSLQQSLFS 442
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 98.7 bits (235), Expect = 2e-21
Identities = 39/72 (54%), Positives = 59/72 (81%)
Frame = +3
Query: 369 QQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELL 548
QQ+L NP+M+R +++ P +Q +MN+PE MRS+I +NPQM++L+ RNPE+ H+LN+P +L
Sbjct: 161 QQQLAQNPNMIRDMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSIL 220
Query: 549 RQTMELARNPAM 584
RQT+E ARNP +
Sbjct: 221 RQTLEAARNPEL 232
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Frame = +3
Query: 384 SNPD--MLRQVLDNPLVQQMM----NDPENMRSLITSNPQMQDLMSRNPEISHMLNNPEL 545
+ PD L Q+L NP + QMM ++P+ M L++ NPQ++ ++ NP++ M+ NP+
Sbjct: 377 ATPDASQLSQLLQNPAISQMMQSVFSNPQYMNQLMSLNPQLRSMLDSNPQLREMMQNPDF 436
Query: 546 LRQ 554
LRQ
Sbjct: 437 LRQ 439
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Frame = +3
Query: 360 ARMQQELLSNP---DMLRQVLDNP-LVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHM 527
A +LL NP M++ V NP + Q+M+ +RS++ SNPQ++++M +NP+
Sbjct: 381 ASQLSQLLQNPAISQMMQSVFSNPQYMNQLMSLNPQLRSMLDSNPQLREMM-QNPDFLRQ 439
Query: 528 LNNPELLRQTMELARN 575
++PE+++Q M L ++
Sbjct: 440 FSSPEMMQQMMTLQQS 455
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +3
Query: 366 MQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITS--NPQMQDLMSRNPE--ISHMLN 533
M+ +++NP M V NP + ++NDP +R + + NP++ M RN + +S++ +
Sbjct: 190 MRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIES 249
Query: 534 NPE---LLRQTMELARNPAM 584
PE +LR+ E + P M
Sbjct: 250 MPEGFNMLRRMYENVQEPLM 269
Score = 31.9 bits (69), Expect = 0.32
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 366 MQQELLSNPDMLRQVLD-NPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLN 533
M Q + NP LR +LD NP +++MM +P+ +R +S MQ +M+ +S N
Sbjct: 407 MNQLMSLNPQ-LRSMLDSNPQLREMMQNPDFLRQ-FSSPEMMQQMMTLQQSLSQNRN 461
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 78 KEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLV 209
KE+++ Q LI+ G+I+ D TL + ++ T+H+V
Sbjct: 44 KELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 40.7 bits (91), Expect = 7e-04
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
LK + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 LKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVLR 224
Score = 37.1 bits (82), Expect = 0.009
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +3
Query: 111 PEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
P+Q LIFAGK + D TL +N+++ T+HL+++
Sbjct: 38 PDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLR 72
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK ++D TL +NI+ T+HLV++
Sbjct: 104 VKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLR 150
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 180 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 226
Score = 33.9 bits (74), Expect = 0.080
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDA-DTLKQHNIKDGLTVHLVIK 215
+K + K +P+Q LIFAG+ + D TL +NI+ T+HLV++
Sbjct: 256 VKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLVLR 303
Score = 30.3 bits (65), Expect = 0.99
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 114 EQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+Q LIF+GK+++D TL ++I+ +HL ++
Sbjct: 41 DQQRLIFSGKLLDDGRTLADYSIQKDSILHLALR 74
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 254 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 330 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 254 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 254 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 254 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 330 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 254 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 254 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 330 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 376
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 254 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 254 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 178 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 224
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 254 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 300
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 35.1 bits (77), Expect = 0.035
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVI 212
+KE + K P Q LI+AGK + D T K + I+ G +HLV+
Sbjct: 102 IKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVL 147
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 177 VKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 223
Score = 34.3 bits (75), Expect = 0.061
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL NI+ T+HLV++
Sbjct: 102 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLR 147
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVI 212
+KE + K P Q LI+AGK + D T K +NI+ G +HLV+
Sbjct: 102 IKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVL 147
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + K P Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 104 VKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 150
Score = 35.1 bits (77), Expect = 0.035
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K + +K +Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 28 VKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLR 74
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHL 206
+K + K + P+Q L+F G + D TL +NI++ T+HL
Sbjct: 418 VKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHL 461
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+KE + K +P+Q LIF G+ + D TL ++I T++LV++
Sbjct: 577 VKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLR 623
Score = 30.7 bits (66), Expect = 0.75
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 126 LIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
LIFAGK + TL +NI+ G T++LV +
Sbjct: 285 LIFAGKPLEGGRTLAHYNIQKGSTLYLVTR 314
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 108 EPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVI 212
+P LIF GK + D TL ++I+ T+HLV+
Sbjct: 357 QPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVL 391
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 126 LIFAGKIMNDADTLKQHNIKDGLTVH 203
LIF G+++ + TL +NI+ G T+H
Sbjct: 518 LIFGGRVLVGSRTLLDYNIQKGSTIH 543
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/46 (30%), Positives = 30/46 (65%)
Frame = +3
Query: 78 KEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
KE ++S+ Q LIF G+++ D L ++++++G T+HL+++
Sbjct: 50 KEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLIVR 95
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 30.3 bits (65), Expect = 0.99
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLV 209
+K + K +Q LIF GK + D TL +NI++ +HL+
Sbjct: 111 IKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLI 155
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIM-NDAD---TLKQHNIKD 188
L++ ++ + +PE + LIFAGKI+ +D D TL Q IK+
Sbjct: 26 LRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKE 67
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 18 STRISSFRH---IKTQYFHSF*-LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIK 185
S R+S+F H + + +F LK VLS EP+Q L+F GK D + L +
Sbjct: 71 SIRVSTFAHFHDLSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKEREDHEYLHMVGVG 130
Query: 186 D 188
D
Sbjct: 131 D 131
>At4g02920.2 68417.m00396 expressed protein
Length = 419
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +3
Query: 378 LLSNPDMLRQVLDNPLVQQMMNDPE-NMRS------LITSNPQMQDLMSRNPEISHMLNN 536
L N ++ + VLD LV+ MM +PE ++RS +SNP++ DL+S E + N+
Sbjct: 155 LYLNQELGKPVLD--LVRDMMENPEFSVRSNGHVLFSSSSNPELNDLLSIASEFNLSRNS 212
Query: 537 PELLRQTMEL 566
RQ L
Sbjct: 213 TTKWRQLSPL 222
>At4g02920.1 68417.m00395 expressed protein
Length = 418
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +3
Query: 378 LLSNPDMLRQVLDNPLVQQMMNDPE-NMRS------LITSNPQMQDLMSRNPEISHMLNN 536
L N ++ + VLD LV+ MM +PE ++RS +SNP++ DL+S E + N+
Sbjct: 154 LYLNQELGKPVLD--LVRDMMENPEFSVRSNGHVLFSSSSNPELNDLLSIASEFNLSRNS 211
Query: 537 PELLRQTMEL 566
RQ L
Sbjct: 212 TTKWRQLSPL 221
>At3g51780.1 68416.m05678 BAG domain-containing protein low
similarity to SP|Q99933 BAG-family molecular chaperone
regulator-1 {Homo sapiens}; contains Pfam profile
PF02179: BAG (Apoptosis regulator Bcl-2 protein) domain
Length = 269
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 215
+K+ L K E +L ++F G +DA+ L+ +KD + +V++
Sbjct: 72 VKKALVQKTGLEASELKILFRGVERDDAEQLQAAGVKDASKLVVVVE 118
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 75 LKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLV 209
LK L + P LIF GK++ + TLKQ ++ G + L+
Sbjct: 560 LKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLMLM 604
>At5g62990.1 68418.m07903 hypothetical protein
Length = 494
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/41 (29%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 432 QMMND-PENMRSLITSNPQMQDLMSRNPEISHMLNNPELLR 551
++ ND P+ +++ TS + +L+S +PE+++ + +PE+ R
Sbjct: 208 RLCNDYPDKFKTVDTSYGRALELVSSDPELANQMPSPEVDR 248
>At1g47330.1 68414.m05240 expressed protein contains Pfam profile
PF01595: Domain of unknown function
Length = 527
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 354 LQARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHM 527
++ +Q+E+L D + N + M PEN+ S+ITS Q + + SHM
Sbjct: 424 IEELLQEEILDETDEYVNI-HNRIRVNMHASPENLPSVITSITQSSSGSTSPNQTSHM 480
>At5g66020.1 68418.m08313 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain; non-consensus AT donor splice site
at exon 7, TA donor splice site at exon 10, AT acceptor
splice at exon 13
Length = 549
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 469 MRLRIFSGSFIICCTNGLSKTCLSISGLDRS 377
+RL F ++I T+G S +CL IS LD S
Sbjct: 11 LRLWEFPDQYVIEPTDGSSASCLDISRLDGS 41
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,501,554
Number of Sequences: 28952
Number of extensions: 247594
Number of successful extensions: 704
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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