Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0306
         (382 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    25   0.26 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    20   9.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    20   9.6  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 25.0 bits (52), Expect = 0.26
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 85  VEHVLL-CYLQRQ*NMLLGLSSFHAAVTQFY 174
           VEH+L+ CY+      + G SSF A + QFY
Sbjct: 43  VEHLLIQCYIAVS---IFGSSSFEADLRQFY 70


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 9/44 (20%), Positives = 23/44 (52%)
 Frame = -2

Query: 309 DMRMLFITKENIFILYKVCPLNLNVIAGFLIKVVYVTLQSIILL 178
           D+  LFI +E   +  +VC   + V    ++  + +T  +++++
Sbjct: 152 DLLTLFIKEELDLVWREVCTFVVQVYPRLVVNTINLTFLTLLMI 195


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 308 ICECYLLQKKIYLYC 264
           + +CY L++  Y YC
Sbjct: 47  VFKCYNLRRIYYFYC 61



 Score = 20.6 bits (41), Expect = 5.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 95  CCCVTFKDNKTCFLVCLPF 151
           CC   F +    FL+CL +
Sbjct: 183 CCAFIFFNMHLLFLLCLDY 201



 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 225 FLIKVVYVTLQSIILLCVKLGHC 157
           FL+ + Y  +    LLC+   +C
Sbjct: 129 FLLCIYYFVVPLFFLLCIYYFYC 151



 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 225 FLIKVVYVTLQSIILLCV 172
           FL+ + Y     IILLC+
Sbjct: 281 FLLCIYYFYCALIILLCI 298


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 341 CFNMYFVVIQSN 376
           CFN+Y +  +SN
Sbjct: 287 CFNLYHLASKSN 298


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 341 CFNMYFVVIQSN 376
           CFN+Y +  +SN
Sbjct: 287 CFNLYHLASKSN 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,871
Number of Sequences: 336
Number of extensions: 1970
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)