Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0305
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    25   0.63 
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    24   0.83 
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    24   0.83 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   3.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.4  

>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
 Frame = -1

Query: 199 PWIIFHYFGKHS----GCEVIV--SIFEHIREICDGCHCRDRDSKQTNDCLHVC 56
           P  + H+F K S     C+ +   SIF  +  IC+ C+   R+ +  N C   C
Sbjct: 36  PAFLPHHFTKRSFFDIQCKGVYDKSIFAKLDSICEDCYMLFREPQLHNLCRSEC 89


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 0.83
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
 Frame = -1

Query: 199 PWIIFHYFGKHS----GCEVIV--SIFEHIREICDGCHCRDRDSKQTNDCLHVC 56
           P  + H+F K S     C+ +   SIF  +  IC+ C+   R+ +  N C   C
Sbjct: 36  PAFLPHHFTKRSFFDIQCKGVYDKSIFAKLDSICEDCYMLFREPQLHNLCRKNC 89


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 24.2 bits (50), Expect = 0.83
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
 Frame = -1

Query: 199 PWIIFHYFGKHS----GCEVIV--SIFEHIREICDGCHCRDRDSKQTNDCLHVC 56
           P  + H+F K S     C+ +   SIF  +  IC+ C+   R+ +  N C   C
Sbjct: 36  PAFLPHHFTKRSFFDIQCKGVYDKSIFAKLDSICEDCYMLFREPQLHNLCRKNC 89


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 36   HLVPNSCSPG 7
            HLVP +C+PG
Sbjct: 1228 HLVPQNCAPG 1237


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 161 ARMFTEVVKNNPGKSVVLS 217
           AR FT+ +KN  G  +V++
Sbjct: 434 ARFFTDCIKNREGFEMVIA 452


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -1

Query: 322 YSIVVREADSFQK 284
           YSI++++ADSF K
Sbjct: 306 YSILIKKADSFCK 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,047
Number of Sequences: 336
Number of extensions: 2558
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)