Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0305
(589 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 48 7e-06
01_01_1152 + 9170628-9171899 44 9e-05
11_01_0767 + 6438648-6438809,6439146-6440000 33 0.22
04_04_0468 - 25447774-25447945,25449016-25449130,25449541-254498... 31 0.90
03_06_0045 - 31259107-31259385,31259509-31259745,31260427-312604... 30 1.2
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 30 1.6
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 2.1
02_01_0384 - 2781362-2782299,2782320-2782428 29 2.7
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 3.6
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 4.8
05_06_0044 - 25150322-25151260 28 4.8
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 6.3
01_06_0373 - 28841462-28842850 28 6.3
01_01_0275 - 2265650-2265904,2266044-2266204,2266381-2266588,226... 28 6.3
11_01_0052 - 396822-396965,397332-397541,397686-397815,397956-39... 27 8.4
10_02_0112 + 5385660-5385821,5386337-5386876 27 8.4
08_01_0123 + 974941-975186,975274-977505 27 8.4
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 27 8.4
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 27 8.4
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 47.6 bits (108), Expect = 7e-06
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Frame = +2
Query: 200 KSVVLSAFSVLPPLAQLALASDGETHEELLKAIG---FPDDDAIRTE-----FASKSRDL 355
K++ +S S+ LA L + GET ++++ +G P A+ + A S
Sbjct: 32 KNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGPG 91
Query: 356 RSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEE 532
G +++ AN V+V +L +A V D + ++ + + F K A + IN+W E
Sbjct: 92 DDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFES 151
Query: 533 NTNNRIKDLVNPDSLSSAT 589
T RIKD + D++ AT
Sbjct: 152 ATAGRIKDFLPKDAVDRAT 170
>01_01_1152 + 9170628-9171899
Length = 423
Score = 44.0 bits (99), Expect = 9e-05
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +2
Query: 197 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPD-DDAIRTEFASKSRDLRSIKGV 373
G++ ++S S LA +A + GET ELL +G P + R+ LR +
Sbjct: 58 GRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNT 117
Query: 374 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRI 550
A V+V G L FA + + + + DF+ A+ +N +V + T I
Sbjct: 118 --SFACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLI 175
Query: 551 KDLVNPDSLSSAT 589
+D++ P+S+ S+T
Sbjct: 176 RDVLPPNSVDSST 188
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 455 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSAT 589
+ +DF + V A K IN WV T N I +++ P+S S T
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDT 87
>04_04_0468 -
25447774-25447945,25449016-25449130,25449541-25449877,
25450299-25450628,25451090-25451362,25451471-25451929,
25452307-25452516,25452617-25452828,25453304-25453404,
25453584-25454008,25454167-25454360,25454436-25454701,
25454809-25455015,25455121-25455281,25455741-25455933,
25456158-25456251,25457238-25457373,25458074-25458202,
25458315-25458449,25458549-25458613,25459875-25459950,
25460775-25460885,25461194-25461371,25462340-25462434
Length = 1557
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 199 PWIIFHYFGKHSG--CEVIVSIFEHIREICDGCHCRDRDSKQTNDCLHVCACVSRMSPRA 26
P +F Y G C +I+ R+ DG C +D + + CL C + ++
Sbjct: 531 PSPVFFYIDGIEGIICRLILPPNAAFRQ-ADGQPCLSKDEAKRDACLKACVKLHKLGALT 589
Query: 25 EFLQPG 8
+FL PG
Sbjct: 590 DFLLPG 595
>03_06_0045 -
31259107-31259385,31259509-31259745,31260427-31260477,
31260541-31260908,31260992-31261250
Length = 397
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 10 RAAGIRHEVTFER--RRHKHEDNHLFVYYRDRGNGSRH 117
R R T E+ RRH H+D + V Y DR G RH
Sbjct: 323 REVSFRDLKTIEKGVRRHFHDDISVIVVYLDRHRGRRH 360
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 391 IRHFKLNAFN*SKITAFTREFCSYSIVVREADSFQKLFMGFTIRS 257
+RH ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 174
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2
Query: 308 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 433
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -2
Query: 378 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAER 211
S++P R+RL S +SG P +SSS SPS A RGG ++ R
Sbjct: 211 SASPASPSRTRLAPPRSPPAGGASGAPR--RSSSAASPSCAGVEGPRGGEVDDGRR 264
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 326 TEFASKSRDLRSIKGVELKMANKVYVHDG 412
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 366 LIDRRSRLLLANSVRIASSSGK 301
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>05_06_0044 - 25150322-25151260
Length = 312
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 395 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDLVN 565
V+V +L+ FA + VF + V++ + N AA++ IN+W T +KD+++
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRS---AGNPAAARAEINEWFSSQTGGFVKDILS 57
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 327 QNSRVKAVIFDQLKALSLKWRIKYTFMMVEN*TRILQSFPGTSSIRTSKTLISRRI 494
+N + K +FD+LKA LK +T + EN +L F + +K I R++
Sbjct: 679 KNKKDKDEVFDELKAAGLKRPCSFTDISSEN--ALLLEFETATDAAAAKAHIRRQL 732
>01_06_0373 - 28841462-28842850
Length = 462
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 209 VLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD 352
+L+ F LP L A+ GE EEL+ A G P A + RD
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIPSFPATHSVLPLMERD 172
>01_01_0275 -
2265650-2265904,2266044-2266204,2266381-2266588,
2266959-2267112,2267557-2267650,2267814-2267919,
2268001-2268075,2268336-2268443,2268672-2268725,
2268818-2268910,2269111-2269206,2269682-2269723
Length = 481
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +2
Query: 11 GLQEFGTR*HSRDAGTNMKTIICLFTIAIAAMAAVTNLSNVLKNGNDNFTARMFTEVVKN 190
G+ E +RD G + + + I + A+T + N+++N D +
Sbjct: 247 GVHEIAHILAARDTGIKLAVPYFVPSWQIGSFGAITRIVNIVRNREDLLKVAAAGPLAGF 306
Query: 191 NPGKSVVLSAFSVLPPLAQLALASDGET-HEELL 289
+ G ++L F +LPP L L D HE L
Sbjct: 307 SLGFVLLLLGF-ILPPSDGLGLVIDPAVFHESFL 339
>11_01_0052 -
396822-396965,397332-397541,397686-397815,397956-398126,
398723-398827,398940-399613,399659-399688,399756-399932
Length = 546
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 326 TEFASKSRDLRSIKGVELKMANKVYVHDG 412
T+ S S+D++ ++ V+ + N VHDG
Sbjct: 139 TQIPSASKDIKEVRAVDEFLPNDFVVHDG 167
>10_02_0112 + 5385660-5385821,5386337-5386876
Length = 233
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +2
Query: 74 ICLFTIAIAAMAAVTNLSNVLKNGNDNF--TARMFTEVVKNNPGKSVVLSAFSVLPPLAQ 247
+CL T+ + + ++ +S++LK G +NF ++ + VV+ P K + +F L +
Sbjct: 43 MCLSTLRYLSSSLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVR 102
Query: 248 LALASDGETHEELLK 292
L +T + K
Sbjct: 103 LCFNRKNKTLGAIFK 117
>08_01_0123 + 974941-975186,975274-977505
Length = 825
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 173 TEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 313
T ++ +P +L L +A A A+DG H L +G PDD
Sbjct: 617 TNILNYSPCSVAILVDRGSLSTVAAAAAAADGFPHRVALYFLGGPDD 663
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 43 ERRRHKHEDNHLFVYYRDRGNGSRH 117
E RR H+D + V Y DR G RH
Sbjct: 79 EVRRRFHDDISIIVVYLDRHRGRRH 103
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 25 RHEVTFERRRHKHEDNHLFVYYRDRGNGSRHKSL*CAQKWKR*LHSQNVYRSSEK*SREK 204
RH E R H+H D+ + R + SRH+ + H + +RSS + R+
Sbjct: 762 RHSKDLEPRHHRHRDSSSEDEHEHRSSKSRHR-----HRDDYHYHEDDEHRSSHRHQRDH 816
Query: 205 R 207
R
Sbjct: 817 R 817
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,920,123
Number of Sequences: 37544
Number of extensions: 297090
Number of successful extensions: 949
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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