Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0304
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.099
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.40 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.8  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    23   2.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   4.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.6  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 0.099
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = +3

Query: 435 YAIPFIGTICFIIPTLAPMYFWGESLNNAWHITVLRYI 548
           Y + F+  + +++     +Y+W +   + WH   L +I
Sbjct: 101 YLLLFVINVLYVLTLCYAVYYWRQQYEDFWHRYTLSFI 138


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +1

Query: 49  LYLCFTSAKLATSGVVLLCYSSLGTLVLQ 135
           LYL F+   + T+G++ + +++   L+LQ
Sbjct: 155 LYLIFSYCPIVTTGIIKIQFATCAHLILQ 183


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 470 DKTYCSYKWYCV 435
           D+TYC   W CV
Sbjct: 38  DETYCDRYWECV 49


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 133 VIPKFPRKNNTIAQHPM*PILLR*NRDKVHIDQQYLVPNSC 11
           +I +  R N   + HP   I  + N   V ++ +   PNSC
Sbjct: 160 LIEEDSRSNEDTSLHPSPRITKKANSVSVKVENRRNSPNSC 200


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 133 VIPKFPRKNNTIAQHPM*PILLR*NRDKVHIDQQYLVPNSC 11
           +I +  R N   + HP   I  + N   V ++ +   PNSC
Sbjct: 108 LIEEDSRSNEDTSLHPSPRITKKANSVSVKVENRRNSPNSC 148


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 133 VIPKFPRKNNTIAQHPM*PILLR*NRDKVHIDQQYLVPNSC 11
           +I +  R N   + HP   I  + N   V ++ +   PNSC
Sbjct: 291 LIEEDSRSNEDTSLHPSPRITKKANSVSVKVENRRNSPNSC 331


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 194 PVDGLQQYCFSEHHFHMGERSQATSQV 274
           P D +  Y   +HH H G    A S V
Sbjct: 63  PADSMVNYTLGQHH-HNGAAVSAASSV 88


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 194 PVDGLQQYCFSEHHFHMGERSQATSQV 274
           P D +  Y   +HH H G    A S V
Sbjct: 122 PADSMVNYTLGQHH-HNGAAVSAASSV 147


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 194 PVDGLQQYCFSEHHFHMGERSQATSQV 274
           P D +  Y   +HH H G    A S V
Sbjct: 63  PADSMVNYTLGQHH-HNGAAVSAASSV 88


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 194 PVDGLQQYCFSEHHFHMGERSQATSQV 274
           P D +  Y   +HH H G    A S V
Sbjct: 122 PADSMVNYTLGQHH-HNGAAVSAASSV 147


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 31  IAGLYGLYLCFTSAKLATSGVVLLCY 108
           +  + GL L   SAK  +   V LCY
Sbjct: 285 LVAMCGLVLICDSAKSESQQTVFLCY 310


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 249 RDHRLHHKYTDTDADPHNATRGFFFSHIGW 338
           R+H    + T+T A   N T  F+ S  GW
Sbjct: 191 RNHLFLVRRTETLAQILNQTVNFYNSAFGW 220


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 374 SNFHHWMFSHQQPADV*EKKTSRSIMR 294
           +NF+ WM +H   +    K+T ++  R
Sbjct: 166 ANFYPWMKAHGDSSATGNKRTRQTYTR 192


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 374 SNFHHWMFSHQQPADV*EKKTSRSIMR 294
           +NF+ WM +H   +    K+T ++  R
Sbjct: 166 ANFYPWMKAHGDSSATGNKRTRQTYTR 192


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 321 FSHIGWLLVRKHPMVKIAGKSLDM 392
           F+ +G  L+    M KIA K LD+
Sbjct: 60  FTLLGTFLISGFQMQKIATKGLDL 83


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 321 FSHIGWLLVRKHPMVKIAGKSLDM 392
           F+ +G  L+    M KIA K LD+
Sbjct: 60  FTLLGTFLISGFQMQKIATKGLDL 83


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 374 SNFHHWMFSHQQPADV*EKKTSRSIMR 294
           +NF+ WM +H   +    K+T ++  R
Sbjct: 166 ANFYPWMKAHGDSSATGNKRTRQTYTR 192


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 423 ILKEDYNKYLTCQGSFQQFSPLDVFAPTT 337
           IL+E  +  +     F  ++P D+FAP T
Sbjct: 483 ILREKPDVKIFLPFRFHIYTPEDLFAPNT 511


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,139
Number of Sequences: 336
Number of extensions: 3908
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)