Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0304
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...   237   5e-63
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...   237   5e-63
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...   237   6e-63
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...   237   6e-63
Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...   215   2e-56
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...   215   2e-56
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei...    29   2.8  
Z81508-6|CAB04147.1|  338|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U23174-5|AAC46711.1|  329|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AF106576-3|AAK68401.1|  329|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC006671-2|AAO21381.1|  459|Caenorhabditis elegans Nuclear hormo...    28   6.4  
U53339-7|AAA96203.1|  345|Caenorhabditis elegans Serpentine rece...    27   8.5  

>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score =  237 bits (580), Expect = 5e-63
 Identities = 100/181 (55%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = +3

Query: 96  AIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKY 275
           +  L+    FGITAGAHRLWSH  YK   P+ I LM+ N+IA QN I  W RDHR HHK+
Sbjct: 80  SFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKW 139

Query: 276 TDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIPFIG 455
           TDTDADPHN TRGFFF+H+GWLLVRKHP VK  G  LD+SD++ +P+L FQ+K+  P + 
Sbjct: 140 TDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVI 199

Query: 456 TICFIIPTLAPMYFWGESLNNAWHIT-VLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKAT 632
             CFI+PT+ P+YFW E+   A+++    RY F+L+ T+ +NSAAH +G+KPYD S+ A 
Sbjct: 200 LFCFILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATWCINSAAHYFGWKPYDTSVSAV 259

Query: 633 Q 635
           +
Sbjct: 260 E 260


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score =  237 bits (580), Expect = 5e-63
 Identities = 100/181 (55%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = +3

Query: 96  AIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKY 275
           +  L+    FGITAGAHRLWSH  YK   P+ I LM+ N+IA QN I  W RDHR HHK+
Sbjct: 80  SFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKW 139

Query: 276 TDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIPFIG 455
           TDTDADPHN TRGFFF+H+GWLLVRKHP VK  G  LD+SD++ +P+L FQ+K+  P + 
Sbjct: 140 TDTDADPHNTTRGFFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVI 199

Query: 456 TICFIIPTLAPMYFWGESLNNAWHIT-VLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKAT 632
             CFI+PT+ P+YFW E+   A+++    RY F+L+ T+ +NSAAH +G+KPYD S+ A 
Sbjct: 200 LFCFILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATWCINSAAHYFGWKPYDTSVSAV 259

Query: 633 Q 635
           +
Sbjct: 260 E 260


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score =  237 bits (579), Expect = 6e-63
 Identities = 100/175 (57%), Positives = 128/175 (73%), Gaps = 1/175 (0%)
 Frame = +3

Query: 102 VLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTD 281
           +L+  G FGITAGAHRLWSH  YK   P+ I LM+ N+IA QN +  W RDHR HHK+TD
Sbjct: 83  LLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTD 142

Query: 282 TDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIPFIGTI 461
           TDADPHN TRGFFF+H+GWLLVRKHP VK  G  LDMSD+  +P+L FQ+K+  P +   
Sbjct: 143 TDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLVILC 202

Query: 462 CFIIPTLAPMYFWGESLNNAWHIT-VLRYIFSLNGTFLVNSAAHLWGYKPYDKSL 623
           CFI+PT+ P+YFW E+   A++     RY F+L+ T+ +NSAAH +G+KPYD S+
Sbjct: 203 CFILPTIIPVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHYFGWKPYDSSI 257


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score =  237 bits (579), Expect = 6e-63
 Identities = 100/175 (57%), Positives = 128/175 (73%), Gaps = 1/175 (0%)
 Frame = +3

Query: 102 VLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTD 281
           +L+  G FGITAGAHRLWSH  YK   P+ I LM+ N+IA QN +  W RDHR HHK+TD
Sbjct: 83  LLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTD 142

Query: 282 TDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIPFIGTI 461
           TDADPHN TRGFFF+H+GWLLVRKHP VK  G  LDMSD+  +P+L FQ+K+  P +   
Sbjct: 143 TDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLVILC 202

Query: 462 CFIIPTLAPMYFWGESLNNAWHIT-VLRYIFSLNGTFLVNSAAHLWGYKPYDKSL 623
           CFI+PT+ P+YFW E+   A++     RY F+L+ T+ +NSAAH +G+KPYD S+
Sbjct: 203 CFILPTIIPVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHYFGWKPYDSSI 257


>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score =  215 bits (526), Expect = 2e-56
 Identities = 91/172 (52%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
 Frame = +3

Query: 102 VLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTD 281
           +L  LG+ G+T GAHRLW+H  YK  L   + LM+ NSIAFQN I  W RDHR HHK+TD
Sbjct: 74  LLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTD 133

Query: 282 TDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIPFIGTI 461
           TDADPH+  RG FF+H+GWLLV+KH  +KI G  LD+SD+Y +P+L FQ+K  +P +G  
Sbjct: 134 TDADPHSTNRGMFFAHMGWLLVKKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIF 193

Query: 462 CFIIPTLAPMYFWGESLNNAWHITVL-RYIFSLNGTFLVNSAAHLWGYKPYD 614
           CF +PT  P+  WGES   A++   L RY F+L+ T+ +NS +H  G++PYD
Sbjct: 194 CFALPTFIPVVLWGESAFIAFYTAALFRYCFTLHATWCINSVSHWVGWQPYD 245


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score =  215 bits (526), Expect = 2e-56
 Identities = 91/172 (52%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
 Frame = +3

Query: 102 VLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTD 281
           +L  LG+ G+T GAHRLW+H  YK  L   + LM+ NSIAFQN I  W RDHR HHK+TD
Sbjct: 74  LLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTD 133

Query: 282 TDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKKYAIPFIGTI 461
           TDADPH+  RG FF+H+GWLLV+KH  +KI G  LD+SD+Y +P+L FQ+K  +P +G  
Sbjct: 134 TDADPHSTNRGMFFAHMGWLLVKKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIF 193

Query: 462 CFIIPTLAPMYFWGESLNNAWHITVL-RYIFSLNGTFLVNSAAHLWGYKPYD 614
           CF +PT  P+  WGES   A++   L RY F+L+ T+ +NS +H  G++PYD
Sbjct: 194 CFALPTFIPVVLWGESAFIAFYTAALFRYCFTLHATWCINSVSHWVGWQPYD 245


>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
           protein F22E10.3 protein.
          Length = 1327

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +3

Query: 273 YTDTDAD-PHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKK--YAI 443
           Y D D D P   T       + + L R      IA + L+   +    L R+ KK  Y +
Sbjct: 49  YVDDDDDAPKMYTPSLLEKILNYALCRGD----IANQQLEAQPVSIPGLFRYGKKFDYLL 104

Query: 444 PFIGTICFII 473
            FIGTIC II
Sbjct: 105 LFIGTICAII 114


>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
           related (146.8 kD)(pgp-14) protein.
          Length = 1327

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +3

Query: 273 YTDTDAD-PHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDIYCNPLLRFQKK--YAI 443
           Y D D D P   T       + + L R      IA + L+   +    L R+ KK  Y +
Sbjct: 49  YVDDDDDAPKMYTPSLLEKILNYALCRGD----IANQQLEAQPVSIPGLFRYGKKFDYLL 104

Query: 444 PFIGTICFII 473
            FIGTIC II
Sbjct: 105 LFIGTICAII 114


>Z81508-6|CAB04147.1|  338|Caenorhabditis elegans Hypothetical
           protein F20E11.10 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +3

Query: 459 ICFIIPTLAPMYFWGESLNNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPY 611
           ICFIIP L   + + E   N   +     I SL+G  +V++ A L  +KPY
Sbjct: 256 ICFIIPLLTFWFAFLEGYYNQGLVNFQFIIASLHG--IVSTLAMLLLHKPY 304


>U23174-5|AAC46711.1|  329|Caenorhabditis elegans Hypothetical
           protein R10H1.3 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 23/100 (23%), Positives = 42/100 (42%)
 Frame = +3

Query: 102 VLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTD 281
           ++F   NFG   G   +W     K KL ++ +    NS  +QN +   +  +  H+   D
Sbjct: 168 MVFSRRNFG--GGTVMVWGAFTEKKKLEIQFVSSKMNSTDYQNVLELELSKYLRHYSRKD 225

Query: 282 TDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDI 401
                 NAT     S   +  ++K  ++    +S D++ I
Sbjct: 226 FRFQQDNATIHVSNSTRDYFKLKKINLLDWPARSPDLNPI 265


>AF106576-3|AAK68401.1|  329|Caenorhabditis elegans Hypothetical
           protein W07E6.6 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 23/100 (23%), Positives = 42/100 (42%)
 Frame = +3

Query: 102 VLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTD 281
           ++F   NFG   G   +W     K KL ++ +    NS  +QN +   +  +  H+   D
Sbjct: 168 MVFSRRNFG--GGTVMVWGAFTEKKKLEIQFVSSKMNSTDYQNVLELELSKYLRHYSRKD 225

Query: 282 TDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDI 401
                 NAT     S   +  ++K  ++    +S D++ I
Sbjct: 226 FRFQQDNATIHVSNSTRDYFKLKKINLLDWPARSPDLNPI 265


>AC006671-2|AAO21381.1|  459|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 88, isoform b protein.
          Length = 459

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 23/100 (23%), Positives = 42/100 (42%)
 Frame = +3

Query: 102 VLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTD 281
           ++F   NFG   G   +W     K KL ++ +    NS  +QN +   +  +  H+   D
Sbjct: 298 MVFSRRNFG--GGTVMVWGAFTEKKKLEIQFVSSKMNSTDYQNVLELELSKYLRHYSRKD 355

Query: 282 TDADPHNATRGFFFSHIGWLLVRKHPMVKIAGKSLDMSDI 401
                 NAT     S   +  ++K  ++    +S D++ I
Sbjct: 356 FRFQQDNATIHVSNSTRDYFKLKKINLLDWPARSPDLNPI 395


>U53339-7|AAA96203.1|  345|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 13 protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 440 NTIYRNNMFYHTDISSNVFLG*KLKQRLAYYSFKIHFQSQWHFSCK 577
           NT+YR + FY   +SS    G      L Y+ FK  FQ  +H + K
Sbjct: 18  NTVYRFSQFYTFSVSSFAVPG------LIYFMFKRLFQLYFHGNLK 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,577,438
Number of Sequences: 27780
Number of extensions: 344050
Number of successful extensions: 820
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)