Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0300
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    27   0.17 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    27   0.17 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    27   0.17 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   1.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   1.6  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = +2

Query: 356 EIDTLRNIFTDRVETSQS 409
           E+D++RNIF+D +E SQ+
Sbjct: 11  ELDSIRNIFSDVLEESQT 28


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = +2

Query: 356 EIDTLRNIFTDRVETSQS 409
           E+D++RNIF+D +E SQ+
Sbjct: 71  ELDSIRNIFSDVLEESQT 88


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = +2

Query: 356 EIDTLRNIFTDRVETSQS 409
           E+D++RNIF+D +E SQ+
Sbjct: 71  ELDSIRNIFSDVLEESQT 88


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 161 LENIPFIKLESGHINKPQLLVTFKLG 84
           L+NI    LESG   K Q L T K+G
Sbjct: 545 LKNIDLTVLESGAFCKMQPLRTLKIG 570


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -1

Query: 595 NKGLNSHNPTQRHFCKFCPITVNLDQSLKLKM 500
           N  + SH+   R+ C+ C        SLK+ +
Sbjct: 275 NSHMKSHSNVYRYSCRDCSYATKYCHSLKIHL 306


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -1

Query: 595 NKGLNSHNPTQRHFCKFCPITVNLDQSLKLKM 500
           N  + SH+   R+ C+ C        SLK+ +
Sbjct: 33  NSHMKSHSNVYRYSCRDCSYATKYCHSLKIHL 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,728
Number of Sequences: 336
Number of extensions: 2858
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)