Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0297
         (589 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0348 + 20485884-20485995,20486818-20486951,20487668-20487760     39   0.003
01_06_1583 + 38436958-38437069,38438167-38438300,38438542-384386...    35   0.055
03_04_0184 - 18210875-18212065                                         29   2.1  
05_01_0078 - 523366-525196,525622-525675,527135-529341                 27   8.4  
04_04_0827 - 28457858-28458028,28458513-28458669,28458984-284590...    27   8.4  
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080...    27   8.4  

>05_04_0348 + 20485884-20485995,20486818-20486951,20487668-20487760
          Length = 112

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -1

Query: 589 MVFAGLKKANERADLIAYLKSAT 521
           MVF GLKK  ERADLI+YLK AT
Sbjct: 89  MVFPGLKKPQERADLISYLKEAT 111


>01_06_1583 +
           38436958-38437069,38438167-38438300,38438542-38438608,
           38438900-38438937,38439302-38439391
          Length = 146

 Score = 34.7 bits (76), Expect = 0.055
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = -1

Query: 589 MVFAGLKKANERADLIAYLKSAT 521
           M F GLK+  +RADLIAYLK+AT
Sbjct: 123 MGFNGLKQPQDRADLIAYLKNAT 145


>03_04_0184 - 18210875-18212065
          Length = 396

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 415 AEYITDHTDWAK*EVDSRNVMENASYGIFYYFKITW*QI*DR 540
           A+ I +H  WA  E  ++N   N S G  Y +K+ W  + D+
Sbjct: 258 ADLIAEHEIWAAVEPFAKNEAFNCSNGDLYKWKLLWPMLADQ 299


>05_01_0078 - 523366-525196,525622-525675,527135-529341
          Length = 1363

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 462  IYFLFSPISMISYVFSNVTI 403
            +YF+  P  M++Y FSN TI
Sbjct: 1069 LYFVACPFEMVTYYFSNKTI 1088


>04_04_0827 - 28457858-28458028,28458513-28458669,28458984-28459083,
            28459204-28459231,28459321-28459396,28461276-28461355,
            28461642-28461805,28461897-28462056,28462154-28462277,
            28462901-28463941,28464141-28464259,28464512-28464823,
            28465222-28465425,28466068-28466751,28467301-28467474
          Length = 1197

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/38 (23%), Positives = 26/38 (68%)
 Frame = -3

Query: 476  ITFLESTSYLAQSV*SVMYSAMLQLHYNIKVFVSSKSQ 363
            ITF +  + ++ ++  + + A+  +H+NI+ F+S++++
Sbjct: 1060 ITFYQHYNSISIAICLIYHGAVFNIHFNIRCFLSAETK 1097


>01_06_1112 +
           34606171-34606266,34607170-34607231,34607932-34608019,
           34608104-34608165,34608246-34608342,34608499-34608930,
           34609042-34610061,34610151-34610282,34610354-34610470,
           34610982-34611062,34611321-34611447,34611547-34611592,
           34611663-34611708
          Length = 801

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -1

Query: 418 QQCYNCTIILKYLLVPNHNTIICSCCL*IHMYLVHNV 308
           ++C NC  +    +  N  T IC  C  IH    H V
Sbjct: 24  RKCINCNSVGPQYVCTNFWTFICLSCSGIHREFTHRV 60


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,230,753
Number of Sequences: 37544
Number of extensions: 188304
Number of successful extensions: 350
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)