Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0297
         (589 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038611-8|AAB92035.1|  111|Caenorhabditis elegans Hypothetical ...    37   0.012
Z74046-2|CAA98555.1|  123|Caenorhabditis elegans Hypothetical pr...    35   0.037
AF100305-6|AAC68915.1|  352|Caenorhabditis elegans Hypothetical ...    30   1.4  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine rece...    28   5.7  
Z66519-13|CAI46547.1|  281|Caenorhabditis elegans Hypothetical p...    27   7.5  
Z66519-12|CAA91376.2|  288|Caenorhabditis elegans Hypothetical p...    27   7.5  
Z81109-2|CAB03244.1|  408|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>AF038611-8|AAB92035.1|  111|Caenorhabditis elegans Hypothetical
           protein E04A4.7 protein.
          Length = 111

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = -1

Query: 589 MVFAGLKKANERADLIAYLK 530
           MVFAGLKKA+ERADLI Y++
Sbjct: 85  MVFAGLKKADERADLIKYIE 104


>Z74046-2|CAA98555.1|  123|Caenorhabditis elegans Hypothetical
           protein ZC116.2 protein.
          Length = 123

 Score = 35.1 bits (77), Expect = 0.037
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = -1

Query: 589 MVFAGLKKANERADLIAYLK 530
           MVFAGLKKA+ERADLI +++
Sbjct: 95  MVFAGLKKADERADLIKFIE 114


>AF100305-6|AAC68915.1|  352|Caenorhabditis elegans Hypothetical
           protein W04B5.2 protein.
          Length = 352

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -3

Query: 254 LIDLVSFVIVFSQK--NCH*Q*ISLIYSRSYNVTNFKLLNCKITLIKTSFFR 105
           +I+ + F+I+ + K   C+   + +IYS   ++T+F   NC+    K SF R
Sbjct: 218 IINFILFIIIIANKYKKCYKNFLLIIYSLLNSLTHFSSTNCENFEKKNSFRR 269


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 555 VLTLLPISNLLPSNFKVIENSIRSIFHNISGIYFL 451
           +L  LP  N      + ++N ++SI HNI   YFL
Sbjct: 10  LLLFLPQENRYFVELRSLKNLLKSILHNIENDYFL 44


>U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein22 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 360 QSFAVVVCEYICTWYIMYCVIY 295
           +S  VV+  Y+CTW++   VI+
Sbjct: 210 KSMIVVISLYVCTWFLALLVIF 231


>Z66519-13|CAI46547.1|  281|Caenorhabditis elegans Hypothetical
           protein B0334.2b protein.
          Length = 281

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -2

Query: 552 LTLLPISNLLPSNFKVIENSIRSIFHNISGI 460
           +T+  I++L+   F    + +RSI H+I+GI
Sbjct: 230 ITVSEITSLVAKEFHASPHQVRSILHDINGI 260


>Z66519-12|CAA91376.2|  288|Caenorhabditis elegans Hypothetical
           protein B0334.2a protein.
          Length = 288

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -2

Query: 552 LTLLPISNLLPSNFKVIENSIRSIFHNISGI 460
           +T+  I++L+   F    + +RSI H+I+GI
Sbjct: 237 ITVSEITSLVAKEFHASPHQVRSILHDINGI 267


>Z81109-2|CAB03244.1|  408|Caenorhabditis elegans Hypothetical
           protein R10D12.2 protein.
          Length = 408

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +2

Query: 470 MLWKMLLMEFSITLKLLGSRFEIG 541
           ++WK+ +++FSITLK++     +G
Sbjct: 318 VIWKLGVVDFSITLKIVAQEHYLG 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,337,742
Number of Sequences: 27780
Number of extensions: 201398
Number of successful extensions: 459
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)