Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0297
         (589 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g22840.1 68414.m02852 cytochrome c, putative similar to cytoc...    38   0.005
At4g10040.1 68417.m01641 cytochrome c, putative similar to cytoc...    38   0.007
At1g57600.1 68414.m06536 membrane bound O-acyl transferase (MBOA...    29   2.3  

>At1g22840.1 68414.m02852 cytochrome c, putative similar to
           cytochrome c [Pumpkin, Winter squash] SWISS-PROT:P00051
          Length = 114

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = -1

Query: 589 MVFAGLKKANERADLIAYLKSAT 521
           MVF GLKK  +RADLIAYLK +T
Sbjct: 89  MVFPGLKKPQDRADLIAYLKEST 111


>At4g10040.1 68417.m01641 cytochrome c, putative similar to
           cytochrome c [Pumpkin, Winter squash] SWISS-PROT:P00051
          Length = 112

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = -1

Query: 589 MVFAGLKKANERADLIAYLKSAT 521
           MVF GLKK  +RADLIAYLK  T
Sbjct: 89  MVFPGLKKPQDRADLIAYLKEGT 111


>At1g57600.1 68414.m06536 membrane bound O-acyl transferase (MBOAT)
           family protein low similarity to skinny hedgehog
           [Drosophila melanogaster] GI:15420842; contains Pfam
           profile PF03062: MBOAT family
          Length = 533

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 543 LPISNLLPSNFKVIENSIRSIFH-NISGIYFLFSPISMISYVF 418
           LPI + + + F VI N +RS FH    G+  L+  +S+I  ++
Sbjct: 73  LPILSFVFAVFTVIANGVRSFFHLRAKGMAILWLSMSLIYLIY 115


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,255,705
Number of Sequences: 28952
Number of extensions: 168441
Number of successful extensions: 358
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)