Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0296
         (597 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q232W1 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_Q4AHZ9 Cluster: Sensor protein; n=1; Chlorobium phaeoba...    33   3.9  
UniRef50_A5EUX5 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_Q232W1 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1092

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +2

Query: 428  YGENGRLNVAVIELYVVLRVRGNFMCRIVQDRAYKGLTGSLNTMNLRLF*LTYF 589
            Y   G LN++  EL+ ++ V+  F C I++  A+KG +  +N+   RL    YF
Sbjct: 942  YQIQGALNISFKELWPII-VKSKFSCVILEGMAFKGASKYVNSQTNRLSSSPYF 994


>UniRef50_Q4AHZ9 Cluster: Sensor protein; n=1; Chlorobium
           phaeobacteroides BS1|Rep: Sensor protein - Chlorobium
           phaeobacteroides BS1
          Length = 347

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 168 VNMIRIYICI*LFTIKYVCCSWVFFSMTYAHTILTTQRNRL*LYFILKLLFDEFTVHIIY 347
           +++I   +   LF I YV  S  FFS      ++      L +YFI  +LFD++    + 
Sbjct: 9   ISLIHAGLTTLLFGISYVTISVAFFSFKVLPLVIFLPIIFLFIYFISSILFDQYIKEKLK 68

Query: 348 VKMPSIG 368
           V   SIG
Sbjct: 69  VIYKSIG 75


>UniRef50_A5EUX5 Cluster: Putative uncharacterized protein; n=1;
           Dichelobacter nodosus VCS1703A|Rep: Putative
           uncharacterized protein - Dichelobacter nodosus (strain
           VCS1703A)
          Length = 477

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -2

Query: 491 LSHVKQHTTQLQQHLIFHFPHRNFIKTVREHLKP*IAKIDLANGRHFYIDY 339
           L  +KQH+ +++         +  I+ + +  K  +AKI L +G  F+IDY
Sbjct: 86  LQEIKQHSEEIEAKYARLAEEKAAIERIEQQRKAILAKIALYSGAEFFIDY 136


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,189,840
Number of Sequences: 1657284
Number of extensions: 9014645
Number of successful extensions: 16610
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16603
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)