Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0296
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.64 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 178 IIFTLSLRFILVIIYWY 128
           IIFT+ L F+L I Y+Y
Sbjct: 273 IIFTMHLLFLLCIYYFY 289



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 178 IIFTLSLRFILVIIYW 131
           IIFT+ L F+L I Y+
Sbjct: 121 IIFTVHLLFLLCIYYF 136



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/17 (41%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
 Frame = +3

Query: 201 LFTIKYV-CCSWVFFSM 248
           +FT+  + CC+++FF+M
Sbjct: 175 IFTMHLLFCCAFIFFNM 191



 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 178 IIFTLSLRFILVIIYWYMC 122
           IIFT+ L F+L  IY + C
Sbjct: 154 IIFTVHLLFLL-CIYHFFC 171


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -3

Query: 307  RIKYSYN-LLRCVVSIVCAYVIEKKTHEQQTYLIVNNQIQM*I--LIIFT 167
            +I+  +N LL CV   +C + + +   +++  L++   I M +   IIFT
Sbjct: 1120 KIRICWNVLLNCVYLFLCGFCVYEFASDERIKLVIKAIIIMILSGCIIFT 1169


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 364 LARSILAIYGFKCSLTVLMKFLW 432
           + + I  +YG +  LT+L   +W
Sbjct: 224 MCKKINKLYGHQLLLTILTYLIW 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,568
Number of Sequences: 336
Number of extensions: 2775
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)