Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0296
         (597 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U27185-1|AAA99722.1|  228|Homo sapiens TIG1 protein.                   30   7.2  
BC029640-1|AAH29640.1|  294|Homo sapiens retinoic acid receptor ...    30   7.2  
AK127075-1|BAC86814.1| 1332|Homo sapiens protein ( Homo sapiens ...    29   9.5  
AB028980-1|BAA83009.1|  977|Homo sapiens KIAA1057 protein protein.     29   9.5  

>U27185-1|AAA99722.1|  228|Homo sapiens TIG1 protein.
          Length = 228

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -3

Query: 319 KSNLRIKYSYNLLRCVVSIVCAYVIEKKTHEQQTYLIVNNQIQM 188
           K + R+ +     R  +++ C  +IEKK  +Q+ YL+     Q+
Sbjct: 125 KCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQL 168


>BC029640-1|AAH29640.1|  294|Homo sapiens retinoic acid receptor
           responder (tazarotene induced) 1 protein.
          Length = 294

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -3

Query: 319 KSNLRIKYSYNLLRCVVSIVCAYVIEKKTHEQQTYLIVNNQIQM 188
           K + R+ +     R  +++ C  +IEKK  +Q+ YL+     Q+
Sbjct: 125 KCSARVFFKNQKPRPTINVTCTRLIEKKKRQQEDYLLYKQMKQL 168


>AK127075-1|BAC86814.1| 1332|Homo sapiens protein ( Homo sapiens cDNA
            FLJ45132 fis, clone BRAWH3037979, highly  similar to
            Ubiquitin carboxyl-terminal hydrolase 24 (EC 3.1.2.15).
            ).
          Length = 1332

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 314  TFRRIYSTYNLCKNAVHWLDLS*LFMALNV 403
            TF+ IYS   +CK+  H  +    FMALN+
Sbjct: 1051 TFQGIYSDQKICKDCPHRYEREEAFMALNL 1080


>AB028980-1|BAA83009.1|  977|Homo sapiens KIAA1057 protein protein.
          Length = 977

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 314 TFRRIYSTYNLCKNAVHWLDLS*LFMALNV 403
           TF+ IYS   +CK+  H  +    FMALN+
Sbjct: 158 TFQGIYSDQKICKDCPHRYEREEAFMALNL 187


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,087,795
Number of Sequences: 237096
Number of extensions: 1423283
Number of successful extensions: 1612
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)