Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0295
         (458 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.8  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          20   9.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   9.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   9.6  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 316 LSAPTRPQVLYKSWPFFVAVK 254
           L   T  +++ K+W FF A+K
Sbjct: 318 LDLDTFKKIMQKAWSFFTALK 338


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -3

Query: 378 HLDLIKHTEILVNLVFFGYNFYQLQLDHKY 289
           H D + +++     V   YNF Q +  ++Y
Sbjct: 6   HFDEMSYSQFENQAVLQSYNFLQEKTTYEY 35


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 384 ACHLDLIKHTEILVNLVFFGYNFYQL 307
           AC L  I ++ IL  LVF   NF  L
Sbjct: 203 ACRLFKIDNSLILDLLVFITINFVVL 228


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 443 RSFGMYTI*CVKKWNTEFFELAIW 372
           RSF   TI  V   +  FF++ +W
Sbjct: 136 RSFWAVTIFLVLAASVIFFDVVVW 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,774
Number of Sequences: 336
Number of extensions: 2349
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)