Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0295
         (458 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83105-8|CAB05488.1|  496|Caenorhabditis elegans Hypothetical pr...    31   0.30 
Z82265-7|CAB05171.2|  425|Caenorhabditis elegans Hypothetical pr...    28   2.8  
U41510-6|AAK39382.1|  454|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z83105-8|CAB05488.1|  496|Caenorhabditis elegans Hypothetical
           protein F14H3.8 protein.
          Length = 496

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
 Frame = -1

Query: 224 TNIN*SFLGIIDN*KNCPSYFF-----EQKIIEVSCYLIQKSE-KRNHHFLQYFMHYYFV 63
           T+I   +  I+D  K C   F+     E+KII++  +    S    NH F ++++HY   
Sbjct: 113 TSIKIIYFFILDEYKYCSEDFYTPETEEEKIIQLETWKNATSACTNNHDFKEFYLHYKKN 172

Query: 62  TEIMRPVFRDHLL 24
            +I     RD LL
Sbjct: 173 LKIFSDEERDELL 185


>Z82265-7|CAB05171.2|  425|Caenorhabditis elegans Hypothetical
           protein F02H6.4 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 124 FKNLKKETIIFCNILCTTILLQKSCDRCLEIIFYQTNNNNK 2
           F  + K   +FCN+L  +++L + C++  E   Y    N K
Sbjct: 362 FYVILKNNKLFCNLLVESVVLLRECEKKFEAKLYLFRWNEK 402


>U41510-6|AAK39382.1|  454|Caenorhabditis elegans Hypothetical
           protein ZC449.1 protein.
          Length = 454

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -2

Query: 454 FKSFDLSECTPSNA*KNGILNFLSLPSGSNKTH*NSGKFSFFWV*FLSAPTRPQVLYKS 278
           +++ D+ EC    + ++   NF+ L +G N    +  K   F +  L +PT  Q L K+
Sbjct: 103 YRTSDMGECAGPMSGQHMNPNFVKLNNGKNSLKSSVDKNRNFKISDLPSPTNDQFLQKA 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,082,953
Number of Sequences: 27780
Number of extensions: 198352
Number of successful extensions: 440
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)