Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0293
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   3.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.5  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 96  ARMFTEVVKNNPGKSVVLS 152
           AR FT+ +KN  G  +V++
Sbjct: 434 ARFFTDCIKNREGFEMVIA 452


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -1

Query: 257 YSIVVREADSFQK 219
           YSI++++ADSF K
Sbjct: 306 YSILIKKADSFCK 318


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 1   RQSFVVYYRHRGNGSRQKISLMCSKMETIT 90
           R+  + YY H+   +R     +C+K++  T
Sbjct: 227 RRGELFYYMHQQIIARYNFERLCNKLKRAT 256


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 43  SRQKISLMCSKME 81
           SRQ ++L+C K E
Sbjct: 342 SRQAVNLICDKFE 354


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 43  SRQKISLMCSKME 81
           SRQ ++L+C K E
Sbjct: 342 SRQAVNLICDKFE 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,934
Number of Sequences: 336
Number of extensions: 2408
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)