Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0293
(551 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 54 5e-08
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 53 1e-07
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 52 2e-07
At1g62170.1 68414.m07013 serpin family protein / serine protease... 52 3e-07
At1g64030.1 68414.m07252 serpin family protein / serine protease... 50 8e-07
At2g14540.1 68415.m01628 serpin family protein / serine protease... 44 5e-05
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 44 9e-05
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 33 0.096
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 32 0.29
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 1.6
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 1.6
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 2.7
At1g08680.2 68414.m00965 ARF GAP-like zinc finger-containing pro... 29 2.7
At5g01060.1 68418.m00009 protein kinase family protein contains ... 28 3.6
At3g09060.1 68416.m01065 pentatricopeptide (PPR) repeat-containi... 28 3.6
At2g43210.2 68415.m05371 UBX domain-containing protein contains ... 28 3.6
At2g43210.1 68415.m05370 UBX domain-containing protein contains ... 28 3.6
At2g29110.1 68415.m03538 glutamate receptor family protein (GLR2... 28 3.6
At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containi... 28 4.8
At2g34610.1 68415.m04252 expressed protein 28 4.8
At2g32620.1 68415.m03982 cellulose synthase family protein simil... 28 4.8
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 28 4.8
At2g20210.1 68415.m02363 leucine-rich repeat family protein cont... 27 6.3
At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containi... 27 6.3
At1g07476.1 68414.m00799 hypothetical protein 27 6.3
At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative s... 27 8.3
At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1) ... 27 8.3
At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1) ... 27 8.3
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 27 8.3
At1g67650.1 68414.m07720 expressed protein 27 8.3
At1g27580.1 68414.m03361 F-box family protein similar to F-box p... 27 8.3
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 54.4 bits (125), Expect = 5e-08
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 8/174 (4%)
Frame = +3
Query: 54 DLSNVLKNGNDNFTARMFTEVVKNNP--GKSVVLSAFSVLPPLAQLALASDGETHEELLK 227
+L ++N N N AR+ +V++ + G +VV S S+ L+ +A S+ T EE+L
Sbjct: 2 ELGKSIENQN-NVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILS 60
Query: 228 AIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQ 407
+ P D + A + + L A+ V++ L +F + + + +
Sbjct: 61 FLMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCS 120
Query: 408 NIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSA-----TAAVLVNAIY 551
+DF+ V +N W + +TN IK +++ D + + +L NA+Y
Sbjct: 121 QVDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVY 174
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 53.2 bits (122), Expect = 1e-07
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Frame = +3
Query: 87 NFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTE 266
N + T V +N+ +V+ S S+ L+ +A S G T +++L + F D + +
Sbjct: 16 NLAKHVITTVSQNS---NVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNS- 71
Query: 267 FASKS-----RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKN 428
F+S+ D + G +L +AN ++ +F + D + + DF SK
Sbjct: 72 FSSEIVSAVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKA 131
Query: 429 TVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIY 551
+N W E+ TN I +++ S S T + NA+Y
Sbjct: 132 VEVIAEVNSWAEKETNGLITEVLPEGSADSMTKLIFANALY 172
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 52.4 bits (120), Expect = 2e-07
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Frame = +3
Query: 132 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE 311
G ++V S S+ L +A S+ T E++L I P D + A K+ + G+E
Sbjct: 28 GSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLA-KTVSVALNDGME 86
Query: 312 -----LKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS-KNTVAAKSINDWVEENT 473
L A V++ +F + + +N+ +DF+ K +N W E +T
Sbjct: 87 RSDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHT 146
Query: 474 NNRIKDLVNPDSLSSATAAVLV--NAIY 551
N IK++++ DS+ + ++L+ NA+Y
Sbjct: 147 NGLIKEILSDDSIKTIRESMLILANAVY 174
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 52.0 bits (119), Expect = 3e-07
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Frame = +3
Query: 54 DLSNVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELL 224
D+ +K ND T + + V KN+ + V S S+ L +A +S GE EEL
Sbjct: 63 DVGEAMKKQNDVAIFLTGIVISSVAKNS---NFVFSPASINAALTMVAASSGGEQGEELR 119
Query: 225 KAIGFPDDDAIRTEFASKSRDLRSIKGVE--LKMANKVYVHDGGKLDENFAV--VSRDVF 392
I + E + R++ S+ V+ K K+ V +G +D++ +V +S+D+F
Sbjct: 120 SFILSFLKSSSTDELNAIFREIASVVLVDGSKKGGPKIAVVNGMWMDQSLSVNPLSKDLF 179
Query: 393 ----NSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIY 551
++ +DF SK +N W +TN IKDL+ S++S T V +A+Y
Sbjct: 180 KNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLIKDLLPRGSVTSLTDRVYGSALY 237
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 50.4 bits (115), Expect = 8e-07
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 7/172 (4%)
Frame = +3
Query: 54 DLSNVLKNGNDNFTARMFTEVVKNNPGKS-VVLSAFSVLPPLAQLALASDGE-THEELLK 227
D+ +KN + + V+ + P S V+ S S+ + A G+ ++L
Sbjct: 2 DVREAMKN-QTHVAMILSGHVLSSAPKDSNVIFSPASINSAITMHAAGPGGDLVSGQILS 60
Query: 228 AIGFPDDDAIRTEFASKSR----DLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFN 395
+ D ++T F + D + G ++ AN +++ D F + + F
Sbjct: 61 FLRSSSIDELKTVFRELASVVYADRSATGGPKITAANGLWIDKSLPTDPKFKDLFENFFK 120
Query: 396 SDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAI 548
+ +DF S+ K +N WVE +TNN IKDL+ S++S T + NA+
Sbjct: 121 AVYVPVDFRSEAEEVRKEVNSWVEHHTNNLIKDLLPDGSVTSLTNKIYANAL 172
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 44.4 bits (100), Expect = 5e-05
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Frame = +3
Query: 54 DLSNVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEEL- 221
D+ +KN N+ ++ + V KN+ + V S S+ L A +D +T
Sbjct: 30 DMQEAMKNQNEVSLLLVGKVISAVAKNS---NCVFSPASINAVLTVTAANTDNKTLRSFI 86
Query: 222 ---LKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDV 389
LK+ + +AI E AS +D G ++ N V++ + ++ + +
Sbjct: 87 LSFLKSSSTEETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNF 146
Query: 390 FNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIY 551
F + +DF + +N W +TN+ IK+++ S++S T + NA+Y
Sbjct: 147 FKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALY 201
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 43.6 bits (98), Expect = 9e-05
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 306 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNR 482
+ L +AN V++ L +F + + + + +DF SK + +N W E +TN
Sbjct: 25 LRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGL 84
Query: 483 IKDLVNPDSLSS--ATAAVLVNAIY 551
IK +++ DS+ + ++ VL NA+Y
Sbjct: 85 IKQILSRDSIDTIRSSTLVLANAVY 109
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 33.5 bits (73), Expect = 0.096
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 447 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIY 551
+N W +TN IK+L+ P S+++ T + NA+Y
Sbjct: 39 VNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALY 73
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 31.9 bits (69), Expect = 0.29
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 441 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIY 551
+ +N W ++TN I DL+ S+ S T V NA+Y
Sbjct: 14 QELNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALY 50
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 176 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 63
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 111 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 224
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 149 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 57
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At1g08680.2 68414.m00965 ARF GAP-like zinc finger-containing
protein ZiGA4 (ZIGA4) nearly identical to ARF GAP-like
zinc finger-containing protein ZiGA4 GI:10441354 from
[Arabidopsis thaliana]; contains InterPro accession
IPR001164: Human Rev interacting-like protein (hRIP)
Length = 648
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 21 LSPSRQWQPSEDLSNVLKNGNDNFTARMFTEVVKNNP 131
LS WQ EDLSNVLK+ DN F + ++ NP
Sbjct: 447 LSIPSPWQ--EDLSNVLKDVVDNPPWNAFPDSIEANP 481
>At5g01060.1 68418.m00009 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 499
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 120 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFA 272
KN P K+ + L P +D + ELL+ +G+ +D+ + EF+
Sbjct: 337 KNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFS 387
>At3g09060.1 68416.m01065 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 687
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 173 RRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHIREIF 51
R Q KC ED A + +GK+S + + +F+ +REIF
Sbjct: 70 RSQECKCDEDVALS--VIKTYGKNSMPDQALDVFKRMREIF 108
>At2g43210.2 68415.m05371 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 313 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 134
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 133 PG 128
G
Sbjct: 195 KG 196
>At2g43210.1 68415.m05370 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 313 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 134
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 133 PG 128
G
Sbjct: 195 KG 196
>At2g29110.1 68415.m03538 glutamate receptor family protein (GLR2.8)
(GLUR9) plant glutamate receptor family, PMID:11379626
Length = 947
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 39 WQPSEDLSNVLKNGNDNFTARMFTEVVKNNPGKSVVL 149
W PS L NV N +FT F ++ PGKS ++
Sbjct: 408 WTPSNGLVNVNSNKTTSFTGERFGPLIW--PGKSTIV 442
>At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 511
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 57 LSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIG 236
+S +NGN + +MF + K+ K ++ SVLP A L G E + G
Sbjct: 186 ISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENG 245
Query: 237 FPDD 248
F D+
Sbjct: 246 FFDN 249
>At2g34610.1 68415.m04252 expressed protein
Length = 290
Score = 27.9 bits (59), Expect = 4.8
Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Frame = +3
Query: 69 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELL---KAIGF 239
L N T R+ V KN P + V + A + + L KA G
Sbjct: 137 LPNKKAKVTERIIQAVSKNQPRNKAIEKCEPVTEQNVHIIAAKEETCNASNLMNSKAYGR 196
Query: 240 PDDDAIRTEFASKSRDLRSIKG-------VELKMANKVYVHDGGKLDENFAVVSRDVFNS 398
D R SK R + IK + + + VH G K DE ++ N
Sbjct: 197 SKSDKARGSVISKERRRQEIKHRHKSYDRSQSDSSKWMVVHKGKKADEEMEEATKKWENV 256
Query: 399 DVQNIDFSK--NTVAAKSINDWVE 464
++ +FSK N + + D+++
Sbjct: 257 KEESEEFSKMSNEELNRRVEDFIQ 280
>At2g32620.1 68415.m03982 cellulose synthase family protein similar
to Zea mays cellulose synthase-5 [gi:9622882], -4
[gi:9622880], -9 [gi:9622890]
Length = 757
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 274 LANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILA 95
L+ +V + S P+ S S + PS+ + + G TE PG F VN+ A
Sbjct: 627 LSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVL-VNLAA 685
Query: 94 V 92
+
Sbjct: 686 L 686
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 152 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREI 54
R D +++F KHS CE+ VS E ++
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKL 34
>At2g20210.1 68415.m02363 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 604
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 63 NVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 242
N+ KN TAR ++++ P + ++++++PP A L L T + LK +
Sbjct: 503 NISKNRGGLETARFLSKLIPLAPKLISIDASYNLMPPEALLMLCDSLRTAKGDLKRLDMT 562
Query: 243 DDDAIRTE 266
+ I E
Sbjct: 563 GNSCISHE 570
>At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 491
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 48 SEDLSNVLKNGNDNFTARMFTEVVK 122
+E+L +LKNG DN A +F +++
Sbjct: 429 AENLLEILKNGTDNIGAEIFEPLIR 453
>At1g07476.1 68414.m00799 hypothetical protein
Length = 139
Score = 27.5 bits (58), Expect = 6.3
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = -2
Query: 244 SGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILAVKLSFPFLST 65
+G PI S +VSP+ + G N++ + G FT V++ K S P +
Sbjct: 47 AGAPIPLLSPLFVSPNSHSSLPREGQVNPNSQASPTREGHDFTFPVSLTEKKGSQP---S 103
Query: 64 LERSSDGCHCRDGDSKQQM 8
++ + H GD QM
Sbjct: 104 MDHKIEWQHSAKGDHSDQM 122
>At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative
similar to SP|P04051 DNA-directed RNA polymerase III
largest subunit (EC 2.7.7.6) {Saccharomyces cerevisiae};
contains InterPro accession IPR000722: RNA polymerase,
alpha subunit
Length = 1328
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 6 IICCLLSPSRQWQPSEDLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLS 152
II C+L P +PS + + N ND TAR+ +++ N +LS
Sbjct: 254 IITCMLVPPLSIRPSVMIGGIQSNEND-LTARL-KQIILGNASLHKILS 300
>At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 222 LKAIGFPDDDAIRTEFASKSRDLR 293
++++GFP DD R F DLR
Sbjct: 121 IESVGFPQDDGFRLGFGGGGGDLR 144
>At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 222 LKAIGFPDDDAIRTEFASKSRDLR 293
++++GFP DD R F DLR
Sbjct: 121 IESVGFPQDDGFRLGFGGGGGDLR 144
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 339 HDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKD 491
HD DE + ++++N+ FS+N+ A ++ DW E T + D
Sbjct: 262 HDNDSADETSNASTMKHDEANLKNL-FSRNSTAVDNVTDWHELITEYGLLD 311
>At1g67650.1 68414.m07720 expressed protein
Length = 651
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +3
Query: 69 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 248
L++G + +R++ E+VKN+ ++ ++ LA++ + E +E+ LK + P
Sbjct: 470 LRHGQEEEASRLYEEIVKNHNSTDALV---GLVTTLARVNV-EKAEAYEKQLKPL--PGL 523
Query: 249 DAIRTEFASKSRDLRSIKGV 308
A+ + K+ + I+G+
Sbjct: 524 KAVDVDNLEKTSGAKPIEGI 543
>At1g27580.1 68414.m03361 F-box family protein similar to F-box
protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]; confirmed by FLcDNA GI:16604421; contains
uncharacterized Arabidoppsis domain shared by 33
Arabidopsis proteins;simlar to unknown protein
GB:AAC63676
Length = 364
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 213 EELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYV 338
EE +K + D+D R EF + DLR V+ K N V V
Sbjct: 96 EENVKHMLMDDEDPFRDEFPHAAEDLRGRLWVDDKNGNYVVV 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,268,956
Number of Sequences: 28952
Number of extensions: 219727
Number of successful extensions: 762
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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