Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0292
         (336 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   3.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   3.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   6.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    20   8.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 111  KIVVMNVIRFSYLHSCCVYMXLYLC 185
            KIV ++++  S+L   C     Y+C
Sbjct: 989  KIVWLHLVYISFLGIICAADVFYIC 1013



 Score = 20.6 bits (41), Expect = 4.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 224 LCYSSLGTLVLQVELI 271
           +CYS++GT+    ELI
Sbjct: 300 VCYSTIGTVSKAGELI 315


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 111 KIVVMNVIRFSYLHSCCVYMXLYLC 185
           KIV ++++  S+L   C     Y+C
Sbjct: 270 KIVWLHLVYISFLGIICAADVFYIC 294


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +2

Query: 83  CTPGLAHQTQNCSDE 127
           C PG  H    C D+
Sbjct: 264 CRPGACHNNGTCLDK 278


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 133 ITFITTILCLMGEAWGAMSFS*ST*LSLRYSVSFVL 26
           ++F T +  ++ + +G+M     T  +  Y +SF L
Sbjct: 168 VSFATNLYFIIIQLFGSMKIVKGTLKTAYYLISFAL 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,975
Number of Sequences: 336
Number of extensions: 1549
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)