Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0291
         (607 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BM90 Cluster: Chromosome undetermined scaffold_116, w...    33   6.9  
UniRef50_Q2ACS7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_A0BM90 Cluster: Chromosome undetermined scaffold_116, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_116, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1440

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 141  QLLS*SCRALFHKNTKFTQSQLYHVNTLLYFQCGCCMT 28
            Q+++ SC+  FHK   F   Q Y +    Y +C  C++
Sbjct: 1056 QIVASSCQHTFHKQCLFQNEQKYTIGEFQYLRCPICLS 1093


>UniRef50_Q2ACS7 Cluster: Putative uncharacterized protein; n=1;
           Halothermothrix orenii H 168|Rep: Putative
           uncharacterized protein - Halothermothrix orenii H 168
          Length = 653

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 456 LIFFILRFVFYRPGQDVKLFIYCGIMLYNNSLGTTITLPISAVKQ 590
           ++ FIL   +  P  D+KL +Y GI++    L  T  LP +  +Q
Sbjct: 364 ILGFILLLTYLFPHLDIKLILYSGIIMVGGDLILTFLLPETLFRQ 408


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,866,209
Number of Sequences: 1657284
Number of extensions: 8173781
Number of successful extensions: 16130
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16124
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)