Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0289
         (382 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   0.59 
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   0.78 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   4.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   7.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   7.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   7.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    20   9.6  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.8 bits (49), Expect = 0.59
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 177 LPRSLDLQKKSMWRTASTASDYPPELRNLL 266
           LP  ++L + S WR  S   +Y P L   L
Sbjct: 407 LPAIVELAEDSKWRVRSAIIEYMPLLAGQL 436



 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 228 TASDYPPELRNLLRVRNAAIRA 293
           T +D  P  +NLL+   A +RA
Sbjct: 281 TRTDLVPAFQNLLKDTEAEVRA 302


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 0.78
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +1

Query: 13  SPSQPSHCYEDHGGLE*AVHVPTRSRSANPPLRPGFESIPR 135
           SP+  S C++    +   V+ P+ S ++ P + P    +P+
Sbjct: 173 SPASDSECFDRRKFISALVNAPSVSPASLPSISPSGGFLPK 213


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 196  FKRSRCGGQLPPHQTILRNLGI 261
            F    CGG  P  +++ R LG+
Sbjct: 972  FSNRCCGGSFPLLRSLNRGLGL 993


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 12/49 (24%), Positives = 19/49 (38%)
 Frame = +2

Query: 92  PPILPYGPDSNLSPEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIR 238
           PP     P+  L+P     S  I T   S+ ++   +E        R+R
Sbjct: 98  PPTPSPPPEERLTPSKDASSKRIXTAFTSTQLLELEREFASNMYLSRLR 146


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 107 YGPDSNLSPED 139
           YGPD   +PED
Sbjct: 298 YGPDMIYTPED 308


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 116 DSNLSPEDTVESIN 157
           D++  PED  ES+N
Sbjct: 665 DAHTPPEDDAESLN 678


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 116 DSNLSPEDTVESIN 157
           D++  PED  ES+N
Sbjct: 557 DAHTPPEDDAESLN 570


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 73  VPTRSRSANPP 105
           +PT S SA+PP
Sbjct: 224 IPTPSTSASPP 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,403
Number of Sequences: 336
Number of extensions: 2235
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)