Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0289
(382 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16445.1 68414.m01967 methylase-related similar to YtqB (GI:2... 25 0.17
At5g67280.1 68418.m08483 leucine-rich repeat transmembrane prote... 29 0.79
At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive eff... 29 1.0
At4g20850.1 68417.m03025 subtilase family protein contains simil... 28 1.8
At1g29110.1 68414.m03563 cysteine proteinase, putative contains ... 28 1.8
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 28 2.4
At5g48310.1 68418.m05968 expressed protein 27 3.2
At1g79680.1 68414.m09293 wall-associated kinase, putative simila... 27 4.2
At1g77500.1 68414.m09025 expressed protein contains Pfam domains... 27 4.2
At2g40850.1 68415.m05043 phosphatidylinositol 3- and 4-kinase fa... 27 5.6
At1g02800.1 68414.m00237 endo-1,4-beta-glucanase / cellulase (CE... 27 5.6
At5g62270.1 68418.m07818 expressed protein 26 7.4
At4g27610.2 68417.m03968 expressed protein 26 7.4
At4g27610.1 68417.m03967 expressed protein 26 7.4
At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family... 26 7.4
At3g14690.1 68416.m01858 cytochrome P450, putative similar to GB... 26 7.4
At3g14620.1 68416.m01851 cytochrome P450, putative similar to GB... 26 7.4
At1g49270.1 68414.m05524 protein kinase family protein contains ... 26 7.4
At5g51480.1 68418.m06385 multi-copper oxidase type I family prot... 26 9.7
At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family... 26 9.7
At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family... 26 9.7
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 26 9.7
At2g47010.2 68415.m05873 expressed protein 26 9.7
At2g47010.1 68415.m05872 expressed protein 26 9.7
At1g15970.1 68414.m01916 methyladenine glycosylase family protei... 26 9.7
>At1g16445.1 68414.m01967 methylase-related similar to YtqB
(GI:2952524) [Streptococcus mutans]
Length = 274
Score = 25.4 bits (53), Expect(2) = 0.17
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 264 LRVRNAAIRAYDRLPTHSNRIRMRRLQ 344
LR+R + + A+ P+HS +R L+
Sbjct: 44 LRIRRSCVAAFSSTPSHSRNFPIRGLE 70
Score = 25.0 bits (52), Expect(2) = 0.17
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 69 ARAYSKPLRQSSLTARIRIYPPRTP 143
AR+YS P+R++ +T RI R P
Sbjct: 18 ARSYSLPIRKTLMTFDFRIAMQRNP 42
>At5g67280.1 68418.m08483 leucine-rich repeat transmembrane protein
kinase, putative
Length = 751
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 281 GNPGLRSSSHAFKPDSDASSTTRSPLP 361
GNPGL S HA P D +T+ P P
Sbjct: 273 GNPGLCGSDHAKHPCRDGEATSPPPSP 299
>At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive
effector-related similar to Endonuclease sen1
(Swiss-Prot:Q92355) [Schizosaccharomyces pombe]; similar
to tRNA-splicing endonuclease positive effector
(Swiss-Prot:Q00416) [Saccharomyces cerevisiae]
Length = 1090
Score = 29.1 bits (62), Expect = 1.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 73 VPTRSRSANPPLRPGFESIPRGHRRI 150
VPTRS + NPP G ES + H+ +
Sbjct: 109 VPTRSSAVNPPAEHGGESQSQSHQNL 134
>At4g20850.1 68417.m03025 subtilase family protein contains similarity
to Tripeptidyl-peptidase II (EC 3.4.14.10) (TPP-II)
(Tripeptidyl aminopeptidase) (Swiss-Prot:P29144) [Homo
sapiens]
Length = 1380
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +2
Query: 53 DWNKLCTCLLEAAP---PILPYGPDSNLSPEDTVESINIITDHISSA--IIRSSKEVDVE 217
+W KLCTCL P P+L + LS D + I+ + I +A ++RS VDV+
Sbjct: 1169 EWRKLCTCLKSEYPDYTPLLAKILEGLLSRSDAGDKISHHEEIIEAANEVVRS---VDVD 1225
Query: 218 D 220
+
Sbjct: 1226 E 1226
>At1g29110.1 68414.m03563 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 334
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 258 NLLRVRNAAIRAYDRLPTHSNRIRMRRLQREVHSRLSDAR 377
N R + IR + +P+H+ R + ++R+ S L DAR
Sbjct: 216 NARRAPHTQIRGFQMVPSHNERALLEAVRRQPVSVLIDAR 255
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Frame = +2
Query: 110 GPDSNLSPEDTVESINIIT------DHISSAIIRSSKEVDVEDSFHRIRLSS 247
GPD N +D V S+N+ +H S+ ++ S V + +S + RLS+
Sbjct: 1008 GPDGNSVEDDNVGSLNVPESVRQEKEHGSTPVVCDSDSVSISNSINTERLSA 1059
>At5g48310.1 68418.m05968 expressed protein
Length = 1156
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 86 AAPPILPYGPDSNLSPEDTVESINIITDHI-SSAIIRSSKEVDVEDSFHRIRL 241
+APPI+ G + ++S E + I I D I A + SSK+ + S H R+
Sbjct: 164 SAPPIMESGQEDSISLE-IEKDIQKIEDEICGEAGVESSKQESMRSSSHLYRV 215
>At1g79680.1 68414.m09293 wall-associated kinase, putative similar
to wall-associated kinase 2 GI:4826399 from [Arabidopsis
thaliana]
Length = 769
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 158 CLWIRRCPRGIDSNPGRKGGLAERLRVGTCTAYSN 54
C I C RGID NP G L G Y+N
Sbjct: 321 CKDINECVRGIDGNPVCTAGKCVNLLGGYTCEYTN 355
>At1g77500.1 68414.m09025 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 879
Score = 27.1 bits (57), Expect = 4.2
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +2
Query: 113 PDSNLSPEDTVESINIITDHISSAIIRSSKEVDVEDSFHRIRLSSGT*ESLKS*ERGNPG 292
P+ N++ + + + S I S DVE FH + G S+ S G G
Sbjct: 342 PERNINKREVPMPEQVTESSLDSETISSFSGSDVESEFHYVNGGEGKSSSISSISHG-AG 400
Query: 293 LRSS 304
+SS
Sbjct: 401 TKSS 404
>At2g40850.1 68415.m05043 phosphatidylinositol 3- and 4-kinase
family protein contains Pfam profile PF00454:
Phosphatidylinositol 3- and 4-kinase
Length = 561
Score = 26.6 bits (56), Expect = 5.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 92 PPILPYGPDSNLSPEDTVESINIITDHISSAIIRSSKE 205
PP++P GP +N P D S++ + + +S+KE
Sbjct: 456 PPLVPRGPRANTIPNDVTASMSSSQNQRITHQEKSAKE 493
>At1g02800.1 68414.m00237 endo-1,4-beta-glucanase / cellulase (CEL2)
identical to endo-1,4-beta glucanase; ATCEL2 GI:3132891
from [Arabidopsis thaliana]
Length = 501
Score = 26.6 bits (56), Expect = 5.6
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 106 LRPGFESIPRGHRRIHKHHYRSHLFRD----H*IFKRSRCGGQLPPHQ--TILRNLGIS 264
L GF S H+HH +H ++D +F + G+LPP+Q T N G+S
Sbjct: 20 LSNGFSSSSSRPSIHHRHHLDNHNYKDALSKSILFFEGQRSGKLPPNQRMTWRSNSGLS 78
>At5g62270.1 68418.m07818 expressed protein
Length = 383
Score = 26.2 bits (55), Expect = 7.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 189 LDLQKKSMWRTASTASDYPPELRNLLRVRNAAIRAYDRLPTHSNRIRMRRLQREV 353
LD KSMW T T + + ++ R +NAA + D P+ S + + +EV
Sbjct: 75 LDWDNKSMWSTGLTKEHF--DGVSVGRQKNAANPSSDNTPSDSGDVMSKLGPKEV 127
>At4g27610.2 68417.m03968 expressed protein
Length = 334
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 156 TSLPITSLPRSLDLQKKSMWRTASTASDYPPELRN 260
TSLP+ ++P + MW T+ + PP N
Sbjct: 117 TSLPLVTVPAPSSKENGVMWATSPDRLELPPRPYN 151
>At4g27610.1 68417.m03967 expressed protein
Length = 334
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 156 TSLPITSLPRSLDLQKKSMWRTASTASDYPPELRN 260
TSLP+ ++P + MW T+ + PP N
Sbjct: 117 TSLPLVTVPAPSSKENGVMWATSPDRLELPPRPYN 151
>At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family
protein
Length = 477
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 70 HVPTRSRSANPPLRPGFESIPRGHRRIHKHHY 165
H P S + +P +P P H H HH+
Sbjct: 314 HSPATSSTPSPSPQPETHQYPHHHPHHHHHHH 345
>At3g14690.1 68416.m01858 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 512
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 273 RNAAIRAYDRLPTHSNRIRMRRLQREV 353
R A I Y LPT SNR RM+ RE+
Sbjct: 240 RKAFIPGYSYLPTKSNR-RMKAAAREI 265
>At3g14620.1 68416.m01851 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 515
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 303 LPTHSNRIRMRRLQREVHSRLSD 371
LPT +N +RMR++ +EV SRL +
Sbjct: 254 LPTKNN-LRMRQINKEVKSRLRE 275
>At1g49270.1 68414.m05524 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 699
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 299 SSSHAFKPDSDASSTTRSPLPP 364
SSS + P SD+SS ++SP PP
Sbjct: 75 SSSSSPPPPSDSSSQSQSPPPP 96
>At5g51480.1 68418.m06385 multi-copper oxidase type I family protein
contains Pfam profile: PF00394 Multicopper oxidase;
similar to pollen-specific protein
Length = 592
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +1
Query: 223 LPPHQTILRNLGIS*ELGTRQSGPTIVFPRIQTGFGCVVYN 345
+PP+ + + ++G+ P++ F R GFG ++ N
Sbjct: 105 IPPNWNFTYDFQLKDQIGSYFYSPSLNFQRASGGFGALIIN 145
>At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family
protein
Length = 438
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 126 YPPRTPSNP*TSLPITSLPRSLDLQ 200
YP +P+ P P+ SLP S+ +Q
Sbjct: 253 YPTYSPAPPGNQPPVESLPSSMQMQ 277
>At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family
protein
Length = 496
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 126 YPPRTPSNP*TSLPITSLPRSLDLQ 200
YP +P+ P P+ SLP S+ +Q
Sbjct: 311 YPTYSPAPPGNQPPVESLPSSMQMQ 335
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to beta-transducin
repeats containing protein - Homo sapiens,PID:e1284220;
3' EST no_NP:TC8031
Length = 1446
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 159 SLPITSLPRSLDLQKKSMWRTASTASDYPPELRNLLRVRNAAIR 290
SL + + L + + +W TAS + + LR L+R+ AA R
Sbjct: 1170 SLAMADVLGFLSIIESQIWSTASDSPVHVVSLRTLIRIIRAAPR 1213
>At2g47010.2 68415.m05873 expressed protein
Length = 451
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = -3
Query: 101 GLAERLR--VGTCTAYSNP 51
G AE L VGTC AYSNP
Sbjct: 386 GNAEHLELPVGTCDAYSNP 404
>At2g47010.1 68415.m05872 expressed protein
Length = 451
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = -3
Query: 101 GLAERLR--VGTCTAYSNP 51
G AE L VGTC AYSNP
Sbjct: 386 GNAEHLELPVGTCDAYSNP 404
>At1g15970.1 68414.m01916 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 352
Score = 25.8 bits (54), Expect = 9.7
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 132 PRTPSNP*TSLPITSLPRSLDLQKKSMWRTASTASD 239
P TP++P T+L S S L+K S TAS +SD
Sbjct: 57 PTTPASPRTTLKQCSSLCSSILRKNSASMTASYSSD 92
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,208,224
Number of Sequences: 28952
Number of extensions: 204051
Number of successful extensions: 670
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 527724392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -