Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0287
         (458 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   205   1e-53
Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   194   3e-50
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical pr...    29   2.1  
X75331-1|CAA53080.1|  620|Caenorhabditis elegans acetylcholinest...    29   2.1  
U58731-1|AAB00593.1|  620|Caenorhabditis elegans Abnormal acetyl...    29   2.1  
U40417-9|AAA81417.2|  120|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z35663-10|CAA84731.1|  278|Caenorhabditis elegans Hypothetical p...    27   8.7  
U23179-2|AAK68207.1|  345|Caenorhabditis elegans Serpentine rece...    27   8.7  

>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  205 bits (500), Expect = 1e-53
 Identities = 92/121 (76%), Positives = 105/121 (86%)
 Frame = +1

Query: 91  KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEA 270
           KI+ G +V++ GDEMTRIIWDLIKEKLILP++D+ +H +DLG+E+RD TDDQVTID A A
Sbjct: 5   KIQGGDIVEMQGDEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANA 64

Query: 271 IKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTG 450
             KYNV +KCATITPDE RVEEFKLKKMWKSPNGTIRNILGGTVFRE II KN+PRLV  
Sbjct: 65  TLKYNVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNT 124

Query: 451 W 453
           W
Sbjct: 125 W 125


>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  194 bits (473), Expect = 3e-50
 Identities = 90/122 (73%), Positives = 104/122 (85%), Gaps = 1/122 (0%)
 Frame = +1

Query: 91  KIKA-GPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAE 267
           KIK   PVVD+ GDEMTRIIW  IK KLILP+LD+++  YDLG+E RD+T+DQVTID A 
Sbjct: 26  KIKVDNPVVDLDGDEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAH 85

Query: 268 AIKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 447
           AI +++VGIKCATITPDE R++EF LKKMW SPNGTIRNILGGTVFRE I+CKNIPRLV 
Sbjct: 86  AILEHSVGIKCATITPDEARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVP 145

Query: 448 GW 453
           GW
Sbjct: 146 GW 147


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +1

Query: 178  PFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKKMW 357
            P +D    V ++    R +   +  +      KK+    +  T+ PDE+ VE  KL K  
Sbjct: 2175 PDVDDSEDVEEIMRRPRKRIGPKEEVVLLSVTKKHPHSYRTKTV-PDEEPVEIVKLVKNR 2233

Query: 358  KSPNGTIRNI 387
            + PN T+R +
Sbjct: 2234 RLPNATLREV 2243


>Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical
           protein T26H8.4 protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = -3

Query: 336 FFNSLLIRSYGRTFDAHIVFLYGLSTINCNLIISLITIFH 217
           F+NSL I S   TF    +F+   STI+ + +I LI IFH
Sbjct: 59  FYNSLSISS---TFP--FIFMTEFSTISTSFLILLIAIFH 93


>X75331-1|CAA53080.1|  620|Caenorhabditis elegans
           acetylcholinesterase protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 274 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 164
           +WP++N + +++ +   +  YPS + +   PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560


>U58731-1|AAB00593.1|  620|Caenorhabditis elegans Abnormal
           acetylcholinesterase protein1 protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 274 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 164
           +WP++N + +++ +   +  YPS + +   PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560


>U40417-9|AAA81417.2|  120|Caenorhabditis elegans Hypothetical
           protein T08A9.13 protein.
          Length = 120

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +1

Query: 217 MENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKK 351
           ++   + + +  ++C +A+ +Y+V  K  T+T  E++  E   KK
Sbjct: 44  LQKAKELEQRTRVECQQALDQYDVLKKIPTLTEQERKENETLTKK 88


>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 298 CATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVF 405
           CA   PD    +E +    WK  NGTI+N  G   F
Sbjct: 313 CAVYNPDGIHPKELE---DWKDANGTIKNFPGAKNF 345


>Z35663-10|CAA84731.1|  278|Caenorhabditis elegans Hypothetical
           protein T04A8.12 protein.
          Length = 278

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 197 YMSTTWVWKIVIRLMIKLQLIVLRP*RNTMWASNVRP 307
           Y    ++W+I+I L I  +L+V    RN +  S +RP
Sbjct: 79  YTPEKYIWRILIGLHIGPRLVVAIAFRNFLLGSPLRP 115


>U23179-2|AAK68207.1|  345|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 5 protein.
          Length = 345

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
 Frame = -3

Query: 444 YKSRYILANNSLPENSTTKNITDGP----IRAFPHFLQFKFFN--SLLIRSYGRTFDAHI 283
           +K+ Y+    SL      + I++      I  F H + F  +   S+L+R+ G +F  + 
Sbjct: 214 FKNTYLKKKTSLSVRYALEEISNSSKFTLILTFTHLVFFGAYTIGSILVRTLGESFFGNF 273

Query: 282 VFLYGLSTINC-----NLIISLI 229
           +  Y    +NC     NL+I+ +
Sbjct: 274 LNFYVARGVNCAVPTYNLLIAFV 296


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,970,046
Number of Sequences: 27780
Number of extensions: 226307
Number of successful extensions: 649
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)