Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0279
         (547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   0.76 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   1.7  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   3.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   5.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.3  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   9.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   9.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   9.3  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 481 ILQISSIFWLSPILQIFKIVYKSL 410
           I ++ +IF +  +L +FKI YK L
Sbjct: 116 ICELHTIFLVCNVLTVFKIRYKDL 139


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 19  KIYTQIYLCDLINLKIG 69
           +I    YLCD + LKIG
Sbjct: 280 EILALAYLCDKVQLKIG 296


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 52  INLKIGGAY*VLCNILVMIKS*ISHIYI 135
           I+ K+G  + V CN L + KS I+H++I
Sbjct: 82  ISRKLGEDF-VTCNGLKLPKSTITHLHI 108


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 139 SLYKYVIFKILSLLKCYTVLSKLL 68
           S+   V+  I++   CYTVL+ +L
Sbjct: 63  SIVAMVMGTIVNAFSCYTVLAPVL 86


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 179 ILVIDLLRRTPLTNLFN 229
           ILVI  + RTPL + F+
Sbjct: 8   ILVIPTMARTPLKSSFS 24


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 273 LNPKYMQLEYLNYSKLNKLVSGVRLNKSMTKI 178
           L  ++ Q  YL+  +   L S +RL  +  KI
Sbjct: 55  LERRFRQQRYLSAPEREHLASIIRLTPTQVKI 86


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 412 LFFKITSLCQKVN 374
           L +K+TS+ QK+N
Sbjct: 236 LHYKLTSVMQKIN 248


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 412 LFFKITSLCQKVN 374
           L +K+TS+ QK+N
Sbjct: 236 LHYKLTSVMQKIN 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,336
Number of Sequences: 336
Number of extensions: 2985
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)