Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0279
         (547 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-3|CAB04242.1|  163|Caenorhabditis elegans Hypothetical pr...   120   7e-28
Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    28   5.0  
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    28   5.0  
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.      27   6.7  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    27   6.7  
AC006644-5|AAF39834.1|  786|Caenorhabditis elegans Hypothetical ...    27   6.7  
Z75710-2|CAB00025.2|  381|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AL110501-8|CAI06051.1|  175|Caenorhabditis elegans Hypothetical ...    27   8.8  
AF039038-8|AAM81097.1|  874|Caenorhabditis elegans Hypothetical ...    27   8.8  
AF039038-7|AAM81098.1|  942|Caenorhabditis elegans Hypothetical ...    27   8.8  
AC024772-2|AAF60537.2|  756|Caenorhabditis elegans Osm-9 and cap...    27   8.8  

>Z81523-3|CAB04242.1|  163|Caenorhabditis elegans Hypothetical
           protein F32H2.2 protein.
          Length = 163

 Score =  120 bits (289), Expect = 7e-28
 Identities = 51/77 (66%), Positives = 62/77 (80%)
 Frame = +2

Query: 299 ETEEQNRIRFQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYLKYLQYWREPEYARYLK 478
           E+ E  + RF+VE EFVQ LANPNY++FLAQRGY KE+ FVNYLKYL YW++P+YAR LK
Sbjct: 2   ESVESEKTRFEVECEFVQALANPNYLNFLAQRGYFKEEYFVNYLKYLLYWKDPQYARCLK 61

Query: 479 YPMCLHFLELLQHEAFR 529
           +P CLH LE LQ + FR
Sbjct: 62  FPQCLHMLEALQSQQFR 78


>Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical
           protein K03D3.14 protein.
          Length = 281

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 463 IFWLSPILQIFKIVYKSLFFKI 398
           IFWL+  + +FK++Y SLF  I
Sbjct: 202 IFWLTIFIVVFKVIYISLFTTI 223


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
           protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 16  KKIYTQIYLCDLINLKIGGAY*VLCNILVMIKS*ISHIYIRIK 144
           K I T+ +  D +N+K GG    L N+L+ +K   +H Y+ +K
Sbjct: 863 KNILTRNF--DALNVKNGGTQMSLMNVLMELKKCCNHPYLFVK 903


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 16  KKIYTQIYLCDLINLKIGGAY*VLCNILVMIKS*ISHIYIRIK 144
           K I T+ +  D +N+K GG    L N+L+ +K   +H Y+ +K
Sbjct: 863 KNILTRNF--DALNVKNGGTQMSLMNVLMELKKCCNHPYLFVK 903


>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
            T14G8.1 protein.
          Length = 1787

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 13   RKKIYTQIYL--CDLINLKIGGAY*VLCNILVMIKS*ISHIYIRIK 144
            +KK Y  I     D +N+K GG    L NI++ +K   +H Y+ +K
Sbjct: 872  QKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMK 917


>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
            T14G8.1 protein.
          Length = 1787

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 13   RKKIYTQIYL--CDLINLKIGGAY*VLCNILVMIKS*ISHIYIRIK 144
            +KK Y  I     D +N+K GG    L NI++ +K   +H Y+ +K
Sbjct: 872  QKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMK 917


>Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical
           protein C40H1.9 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 187 DQNNNIFSGYTRQFILSLYKYVIFKIL 107
           +QNN I  G TR+++L L+  ++  ++
Sbjct: 142 NQNNQILEGMTREYVLILFFIILVSVV 168


>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
          Length = 1787

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 13   RKKIYTQIYL--CDLINLKIGGAY*VLCNILVMIKS*ISHIYIRIK 144
            +KK Y  I     D +N+K GG    L NI++ +K   +H Y+ +K
Sbjct: 872  QKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMK 917


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
           protein F39C12.1 protein.
          Length = 5105

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 401 LKEQTFVNYLKYLQYWREPEYARYLKY 481
           L+E TF+  L++L YW    + R + Y
Sbjct: 875 LRESTFIRRLEHLMYWGRRRHERDILY 901


>AC006644-5|AAF39834.1|  786|Caenorhabditis elegans Hypothetical
           protein F55A3.2 protein.
          Length = 786

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = -2

Query: 348 TNSSST*NLIRFCSSVSGITFPAIILN--PKYMQLEYLNYSKLNKLV--SGVRLNKS 190
           T+S+ +  ++R CSS S   FP  +LN  P++ ++E+  +  L  +   S  +L KS
Sbjct: 418 TSSTESRIILRPCSSPSDEQFPYCVLNAIPEHFEVEHALFDILEAMTDDSEFKLEKS 474


>Z75710-2|CAB00025.2|  381|Caenorhabditis elegans Hypothetical
           protein D1081.4 protein.
          Length = 381

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +2

Query: 290 VMPETEEQNRIRFQVELEFVQ---CLANPNYIHFLA 388
           V+P   E N I   +E+EF+Q   C +  N +H +A
Sbjct: 236 VLPRDPEDNSIHSNMEMEFIQNTTCKSYTNSLHKIA 271


>AL110501-8|CAI06051.1|  175|Caenorhabditis elegans Hypothetical
           protein Y79H2A.12 protein.
          Length = 175

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 326 FQVELEFVQCLANPNYIHFLAQRGYLKEQTFVNYL 430
           FQ+  EF + L  P Y       GY    T+ N+L
Sbjct: 76  FQLAFEFGEILVTPVYFSSQVASGYESNDTYPNFL 110


>AF039038-8|AAM81097.1|  874|Caenorhabditis elegans Hypothetical
           protein K06A5.8a protein.
          Length = 874

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 188 IDLLRRTPLTNLFNFE*FKYSSCIYFGFKMMAGKVMPETEEQNRIRFQVELEFVQCLANP 367
           +D +      N F+F  F+Y+   Y  F+++  K+ P     N   F VE E V+CL + 
Sbjct: 82  LDFVEPLKPVNEFDFGAFRYNITKYKFFELLCVKLEPGPLHDN--DFAVE-ELVECLKDL 138

Query: 368 NYI 376
            +I
Sbjct: 139 EHI 141


>AF039038-7|AAM81098.1|  942|Caenorhabditis elegans Hypothetical
           protein K06A5.8b protein.
          Length = 942

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 188 IDLLRRTPLTNLFNFE*FKYSSCIYFGFKMMAGKVMPETEEQNRIRFQVELEFVQCLANP 367
           +D +      N F+F  F+Y+   Y  F+++  K+ P     N   F VE E V+CL + 
Sbjct: 82  LDFVEPLKPVNEFDFGAFRYNITKYKFFELLCVKLEPGPLHDN--DFAVE-ELVECLKDL 138

Query: 368 NYI 376
            +I
Sbjct: 139 EHI 141


>AC024772-2|AAF60537.2|  756|Caenorhabditis elegans Osm-9 and
           capsaicin receptor-relatedprotein 4 protein.
          Length = 756

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -1

Query: 178 NNIFSGYTRQFILSLYKYVIFKILSLLKC-YTVLSKL 71
           +N+   Y R FI+SL ++ +F    L +C +TV+ K+
Sbjct: 583 SNVAESYVRMFIMSLTEFTVF-FEQLEECEHTVIGKI 618


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,475,804
Number of Sequences: 27780
Number of extensions: 252049
Number of successful extensions: 619
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)