BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0278
(411 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein. 84 2e-16
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 82 8e-16
S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase p... 82 8e-16
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 82 8e-16
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 82 8e-16
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 82 8e-16
AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase... 82 8e-16
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 82 8e-16
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 82 8e-16
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 82 8e-16
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 82 8e-16
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 80 2e-15
AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens ... 78 1e-14
BC004936-1|AAH04936.1| 132|Homo sapiens SCD5 protein protein. 74 2e-13
U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein. 29 4.5
AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein. 29 4.5
AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein. 29 4.5
>AC073413-1|AAY40977.1| 256|Homo sapiens unknown protein.
Length = 256
Score = 84.2 bits (199), Expect = 2e-16
Identities = 43/93 (46%), Positives = 51/93 (54%)
Frame = +3
Query: 132 PGLAPSNTKL*CMNVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAH 311
PG + NV+ S LH+ +Y L L AK T + A F L G+TAGAH
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVL-IPKAKPLTLLWAYFCFLLAALGVTAGAH 94
Query: 312 RLWSHNGYKVKLALEILLMVFNSIAFQNTIFTW 410
RLWSH Y+ KL L I L V NS+AFQN IF W
Sbjct: 95 RLWSHRSYRAKLPLRIFLAVANSMAFQNDIFEW 127
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
N+I S LH+ LYG+ L T K T + + +F+ GITAGAHRLWSH YK +L
Sbjct: 75 NIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLP 133
Query: 351 LEILLMVFNSIAFQNTIFTW 410
L + L++ N++AFQN ++ W
Sbjct: 134 LRLFLIIANTMAFQNDVYEW 153
>S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 237
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
N+I S LH+ LYG+ L T K T + + +F+ GITAGAHRLWSH YK +L
Sbjct: 73 NIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLP 131
Query: 351 LEILLMVFNSIAFQNTIFTW 410
L + L++ N++AFQN ++ W
Sbjct: 132 LRLFLIIANTMAFQNDVYEW 151
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
N+I S LH+ LYG+ L T K T + + +F+ GITAGAHRLWSH YK +L
Sbjct: 75 NIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLP 133
Query: 351 LEILLMVFNSIAFQNTIFTW 410
L + L++ N++AFQN ++ W
Sbjct: 134 LRLFLIIANTMAFQNDVYEW 153
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
N+I S LH+ LYG+ L T K T + + +F+ GITAGAHRLWSH YK +L
Sbjct: 75 NIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLP 133
Query: 351 LEILLMVFNSIAFQNTIFTW 410
L + L++ N++AFQN ++ W
Sbjct: 134 LRLFLIIANTMAFQNDVYEW 153
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
N+I S LH+ LYG+ L T K T + + +F+ GITAGAHRLWSH YK +L
Sbjct: 75 NIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLP 133
Query: 351 LEILLMVFNSIAFQNTIFTW 410
L + L++ N++AFQN ++ W
Sbjct: 134 LRLFLIIANTMAFQNDVYEW 153
>AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 242
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
N+I S LH+ LYG+ L T K T + + +F+ GITAGAHRLWSH YK +L
Sbjct: 75 NIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLP 133
Query: 351 LEILLMVFNSIAFQNTIFTW 410
L + L++ N++AFQN ++ W
Sbjct: 134 LRLFLIIANTMAFQNDVYEW 153
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
N+I S LH+ LYG+ L T K T + + +F+ GITAGAHRLWSH YK +L
Sbjct: 75 NIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLP 133
Query: 351 LEILLMVFNSIAFQNTIFTW 410
L + L++ N++AFQN ++ W
Sbjct: 134 LRLFLIIANTMAFQNDVYEW 153
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
N+I S LH+ LYG+ L T K T + + +F+ GITAGAHRLWSH YK +L
Sbjct: 75 NIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLP 133
Query: 351 LEILLMVFNSIAFQNTIFTW 410
L + L++ N++AFQN ++ W
Sbjct: 134 LRLFLIIANTMAFQNDVYEW 153
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
N+I S LH+ LYG+ L T K T + + +F+ GITAGAHRLWSH YK +L
Sbjct: 82 NIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLP 140
Query: 351 LEILLMVFNSIAFQNTIFTW 410
L + L++ N++AFQN ++ W
Sbjct: 141 LRLFLIIANTMAFQNDVYEW 160
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 81.8 bits (193), Expect = 8e-16
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
N+I S LH+ LYG+ L T K T + + +F+ GITAGAHRLWSH YK +L
Sbjct: 75 NIILMSLLHLGALYGITLIPT-CKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLP 133
Query: 351 LEILLMVFNSIAFQNTIFTW 410
L + L++ N++AFQN ++ W
Sbjct: 134 LRLFLIIANTMAFQNDVYEW 153
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 80.2 bits (189), Expect = 2e-15
Identities = 42/91 (46%), Positives = 50/91 (54%)
Frame = +3
Query: 132 PGLAPSNTKL*CMNVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAH 311
PG + NV+ S LH+ +Y L L AK T + A F L G+TAGAH
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVL-IPKAKPLTLLWAYFCFLLAALGVTAGAH 94
Query: 312 RLWSHNGYKVKLALEILLMVFNSIAFQNTIF 404
RLWSH Y+ KL L I L V NS+AFQN IF
Sbjct: 95 RLWSHRSYRAKLPLRIFLAVANSMAFQNDIF 125
>AK024685-1|BAB14961.1| 256|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21032 fis, clone CAE07365. ).
Length = 256
Score = 77.8 bits (183), Expect = 1e-14
Identities = 41/91 (45%), Positives = 49/91 (53%)
Frame = +3
Query: 132 PGLAPSNTKL*CMNVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAH 311
PG + NV+ S LH+ +Y L L AK T + A L G+TAGAH
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVL-IPKAKPLTLLWAYFCLLLAALGVTAGAH 94
Query: 312 RLWSHNGYKVKLALEILLMVFNSIAFQNTIF 404
RLWSH Y+ KL L I L V NS+AFQN IF
Sbjct: 95 RLWSHRSYRAKLPLRIFLAVANSMAFQNDIF 125
>BC004936-1|AAH04936.1| 132|Homo sapiens SCD5 protein protein.
Length = 132
Score = 74.1 bits (174), Expect = 2e-13
Identities = 39/87 (44%), Positives = 47/87 (54%)
Frame = +3
Query: 132 PGLAPSNTKL*CMNVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAH 311
PG + NV+ S LH+ +Y L L AK T + A F L G+TAGAH
Sbjct: 36 PGARGQRQNIVWRNVVLMSLLHLGAVYSLVL-IPKAKPLTLLWAYFCFLLAALGVTAGAH 94
Query: 312 RLWSHNGYKVKLALEILLMVFNSIAFQ 392
RLWSH Y+ KL L I L V NS+AFQ
Sbjct: 95 RLWSHRSYRAKLPLRIFLAVANSMAFQ 121
>U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.
Length = 3321
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 392 LKSNTVEDHQQDLEGQFDFVTIMRPQTMSSSCNTKVPKEE 273
+K N +EDHQ++L +M+ + + KV KEE
Sbjct: 719 VKHNLIEDHQKELNNAKQKTELMKQEFQRKETDWKVMKEE 758
>AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.
Length = 3336
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 392 LKSNTVEDHQQDLEGQFDFVTIMRPQTMSSSCNTKVPKEE 273
+K N +EDHQ++L +M+ + + KV KEE
Sbjct: 719 VKHNLIEDHQKELNNAKQKTELMKQEFQRKETDWKVMKEE 758
>AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.
Length = 3284
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 392 LKSNTVEDHQQDLEGQFDFVTIMRPQTMSSSCNTKVPKEE 273
+K N +EDHQ++L +M+ + + KV KEE
Sbjct: 746 VKHNLIEDHQKELNNAKQKTELMKQEFQRKETDWKVMKEE 785
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,114,351
Number of Sequences: 237096
Number of extensions: 1095561
Number of successful extensions: 1819
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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