Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0278
         (411 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...    86   1e-17
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...    86   1e-17
AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...    85   2e-17
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...    85   2e-17
Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...    83   6e-17
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...    83   6e-17
Z81587-2|CAB04702.2|  339|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    27   4.0  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    27   4.0  
Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical pr...    26   9.2  
Z72510-3|CAA96653.1|  366|Caenorhabditis elegans Hypothetical pr...    26   9.2  

>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score = 85.8 bits (203), Expect = 1e-17
 Identities = 38/80 (47%), Positives = 46/80 (57%)
 Frame = +3

Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
           NV  F+ LH A   GLY     AK  T +   +L+  G FGITAGAHRLWSH  YK    
Sbjct: 51  NVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTP 110

Query: 351 LEILLMVFNSIAFQNTIFTW 410
           + I LM+ N+IA QN +  W
Sbjct: 111 MRIFLMILNNIALQNDVIEW 130


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score = 85.8 bits (203), Expect = 1e-17
 Identities = 38/80 (47%), Positives = 46/80 (57%)
 Frame = +3

Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
           NV  F+ LH A   GLY     AK  T +   +L+  G FGITAGAHRLWSH  YK    
Sbjct: 51  NVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTP 110

Query: 351 LEILLMVFNSIAFQNTIFTW 410
           + I LM+ N+IA QN +  W
Sbjct: 111 MRIFLMILNNIALQNDVIEW 130


>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score = 84.6 bits (200), Expect = 2e-17
 Identities = 39/80 (48%), Positives = 47/80 (58%)
 Frame = +3

Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
           NV  F+ LH+A   GLY     AK  T+V +  L+    FGITAGAHRLWSH  YK    
Sbjct: 50  NVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHKSYKATTP 109

Query: 351 LEILLMVFNSIAFQNTIFTW 410
           + I LM+ N+IA QN I  W
Sbjct: 110 MRIFLMLLNNIALQNDIIEW 129


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score = 84.6 bits (200), Expect = 2e-17
 Identities = 39/80 (48%), Positives = 47/80 (58%)
 Frame = +3

Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
           NV  F+ LH+A   GLY     AK  T+V +  L+    FGITAGAHRLWSH  YK    
Sbjct: 50  NVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHKSYKATTP 109

Query: 351 LEILLMVFNSIAFQNTIFTW 410
           + I LM+ N+IA QN I  W
Sbjct: 110 MRIFLMLLNNIALQNDIIEW 129


>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score = 83.4 bits (197), Expect = 6e-17
 Identities = 40/80 (50%), Positives = 47/80 (58%)
 Frame = +3

Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
           NV  F  LHI  L GLY     AK AT     +L  LG+ G+T GAHRLW+H  YK  L+
Sbjct: 42  NVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLS 101

Query: 351 LEILLMVFNSIAFQNTIFTW 410
             + LM+ NSIAFQN I  W
Sbjct: 102 WRVFLMLINSIAFQNDIIDW 121


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score = 83.4 bits (197), Expect = 6e-17
 Identities = 40/80 (50%), Positives = 47/80 (58%)
 Frame = +3

Query: 171 NVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLA 350
           NV  F  LHI  L GLY     AK AT     +L  LG+ G+T GAHRLW+H  YK  L+
Sbjct: 42  NVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLS 101

Query: 351 LEILLMVFNSIAFQNTIFTW 410
             + LM+ NSIAFQN I  W
Sbjct: 102 WRVFLMLINSIAFQNDIIDW 121


>Z81587-2|CAB04702.2|  339|Caenorhabditis elegans Hypothetical
           protein T06G6.2 protein.
          Length = 339

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 213 GLYLCFTSAKLA-TSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLALEILLMVFNSIAF 389
           GL    TS  +  +SVL + +  L  +        LW +N +     L +L+ + NSI  
Sbjct: 18  GLTNALTSITVKMSSVLVVTVILLSYYFARLAIRTLWKNNIFSNSTRLILLVCLLNSIIH 77

Query: 390 QNTI 401
           Q T+
Sbjct: 78  QTTM 81


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 81  SNTSRDNHVDYEKLIAPP 134
           SN  RD+HV +E L APP
Sbjct: 472 SNPRRDSHVSFETLEAPP 489


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 81  SNTSRDNHVDYEKLIAPP 134
           SN  RD+HV +E L APP
Sbjct: 472 SNPRRDSHVSFETLEAPP 489


>Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.4 protein.
          Length = 339

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +3

Query: 234 SAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLALEILLMVFNSIAFQNTI 401
           + K++   LA V+     F + A    LW++N +     L +++ + NS+  Q+T+
Sbjct: 27  TVKVSFVFLATVILLSYYFAVLA-IRALWNNNIFSNSTRLILIVCLLNSVVHQSTM 81


>Z72510-3|CAA96653.1|  366|Caenorhabditis elegans Hypothetical
           protein F53B7.4 protein.
          Length = 366

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 78  NSNTSRDNHVDYEKLIAPPGLAP 146
           NSN SR   + Y +   PP LAP
Sbjct: 231 NSNASRHTFIRYLRQAIPPALAP 253


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,074,855
Number of Sequences: 27780
Number of extensions: 170894
Number of successful extensions: 377
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)