Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0278
         (411 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ...    34   0.043
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ...    33   0.075
At3g15850.1 68416.m02005 fatty acid desaturase family protein si...    29   0.92 
At1g02510.1 68414.m00202 outward rectifying potassium channel, p...    29   0.92 
At3g15870.1 68416.m02007 fatty acid desaturase family protein si...    28   2.8  
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain...    27   4.9  
At1g06350.1 68414.m00671 fatty acid desaturase family protein si...    27   4.9  

>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
           delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
           GI:2970034 from [Arabidopsis thaliana]
          Length = 305

 Score = 33.9 bits (74), Expect = 0.043
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +3

Query: 258 LAIVLFFLGNFGITAGAHRLWSHNGYKVKLALEILLMVFNSIAFQNTIFTW 410
           +A++++ +G  GIT   HR  +H  +KV   LE        +A Q     W
Sbjct: 66  VALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDW 116


>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
           delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
           [Arabidopsis thaliana]
          Length = 307

 Score = 33.1 bits (72), Expect = 0.075
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +3

Query: 258 LAIVLFFLGNFGITAGAHRLWSHNGYKVKLALEILLMVFNSIAFQNTIFTW 410
           +  + + +G  GIT   HR  +H  +KV   LE LL     +A Q     W
Sbjct: 68  VTFLFYTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDW 118


>At3g15850.1 68416.m02005 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 371

 Score = 29.5 bits (63), Expect = 0.92
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +3

Query: 246 ATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKLALEILLMVFNSIAFQNTIFTW 410
           A SV   +    G  GIT   HR  SH  +K+   LE L     + A Q     W
Sbjct: 127 AVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDW 181


>At1g02510.1 68414.m00202 outward rectifying potassium channel,
           putative (KCO4) similar to kco1 [Arabidopsis thaliana]
           gi|2230761|emb|CAA69158; member of the 2 pore, 4
           transmembrane (2P/4TM) K+ channel family, PMID:11500563
          Length = 284

 Score = 29.5 bits (63), Expect = 0.92
 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
 Frame = +1

Query: 106 LIMKNSLHP-QASPHQTQ----NCSA*T*YVLAIYILLVYMDF 219
           L+ +N LHP ++SP +TQ    + S  T  VLA+ +LLVY+ F
Sbjct: 6   LLNENLLHPNESSPEETQVTTVSKSKWTILVLAMILLLVYLTF 48


>At3g15870.1 68416.m02007 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 292

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +3

Query: 270 LFFLGNFGITAGAHRLWSHNGYKVKLALEILLMVFNSIAFQNTIFTW 410
           L F+    IT   HR  SH  + +   LE L      +AFQ     W
Sbjct: 58  LVFINGICITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEW 104


>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
           protein contains Pfam profile PF00169: PH domain
          Length = 1322

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 264 IVLFFLGNFGITAGAHRLWSH 326
           + LFFL + G     HRLW H
Sbjct: 277 LYLFFLTDAGFLRNLHRLWKH 297


>At1g06350.1 68414.m00671 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 300

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 23/81 (28%), Positives = 31/81 (38%)
 Frame = +3

Query: 168 MNVIRFSYLHIAGLYGLYLCFTSAKLATSVLAIVLFFLGNFGITAGAHRLWSHNGYKVKL 347
           ++V+R S + I     L   F + K       +VLF L    IT   HR  SH  +K+  
Sbjct: 32  VDVVRASVVVIVHFLCLLAPF-NFKWEALRFGLVLFALTTLSITFSFHRNLSHRSFKIPK 90

Query: 348 ALEILLMVFNSIAFQNTIFTW 410
            LE         A Q     W
Sbjct: 91  WLEYPWAYSAVFALQGDPMDW 111


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,420,378
Number of Sequences: 28952
Number of extensions: 155935
Number of successful extensions: 340
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 615542944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)