Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0275
         (533 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TC26 Cluster: Predicted protein; n=1; Nematostella ve...    33   3.1  
UniRef50_Q56424 Cluster: MocA; n=3; Bacteroides|Rep: MocA - Bact...    32   9.5  
UniRef50_Q4UCH8 Cluster: Putative uncharacterized protein; n=3; ...    32   9.5  

>UniRef50_A7TC26 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 583

 Score = 33.5 bits (73), Expect = 3.1
 Identities = 16/78 (20%), Positives = 36/78 (46%)
 Frame = -3

Query: 393 PFMKTISKRLYRNKKVCKKFTFRYDCHY*NRLSFSFNHSFASVVFDMNTRSG*HSVVVL* 214
           P ++ +S+R Y NK +      +Y+    + L FS+ H   + +F+   R     +  L 
Sbjct: 506 PLLELLSERSYANKTIAASLNVQYEDKEFHNLVFSYIHMMHNRIFNAKQRHNEFIIYELL 565

Query: 213 NQYIARILIEYRYQMITI 160
           +++    +   +Y+ I +
Sbjct: 566 SRHYKSFIARKKYEKIPV 583


>UniRef50_Q56424 Cluster: MocA; n=3; Bacteroides|Rep: MocA -
           Bacteroides fragilis
          Length = 318

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -3

Query: 384 KTISKR--LYRNKKVCKKFTFRYDCHY*N 304
           KTIS +   YRN+KVCK  T +Y  H+ N
Sbjct: 122 KTISDKNDFYRNEKVCKMLTAKYRLHFAN 150


>UniRef50_Q4UCH8 Cluster: Putative uncharacterized protein; n=3;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 774

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
 Frame = -3

Query: 495 KSLEIFFFYKNTFYVRISI*HYSH*LIN------RRTSRRPFMKTISKRLYRNKKVCKKF 334
           K +E+FF+Y N+ Y   S  + S  L N       + S + F   + KR Y  K    + 
Sbjct: 431 KEVEMFFYYINSKYKSQSTPYSSSCLSNTHSTDAEKESYKHFYTILFKRTYGEKLNSFEL 490

Query: 333 TFRYDCHY*NRLSFSFNHSFA 271
            FR +  Y NR+   F   F+
Sbjct: 491 RFRTNLAYFNRIGLKFPRLFS 511


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,133,853
Number of Sequences: 1657284
Number of extensions: 7859099
Number of successful extensions: 14745
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14745
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)