Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0275
         (533 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g09430.1 68417.m01553 disease resistance protein (TIR-NBS-LRR...    27   7.9  
At1g11910.1 68414.m01374 aspartyl protease family protein contai...    27   7.9  

>At4g09430.1 68417.m01553 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1039

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -2

Query: 508 ELYDQIIRNIFLL*KYVLCKDLNMTLQSLINQQTHFKKAIYEDNF 374
           E+YD + RNIFL  K+V+     + L S ++  TH  K ++ D +
Sbjct: 510 EIYDVLARNIFL--KHVVDITSKLQLISDVSSITHGLKLLHWDAY 552


>At1g11910.1 68414.m01374 aspartyl protease family protein contains
           Pfam profiles: PF00026 eukaryotic aspartyl protease,
           PF03489 surfactant protein B, PF05184 saposin-like type
           B, region 1
          Length = 506

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = -3

Query: 243 SG*HSVVVL*N----QYIARILIEYRYQMITIQ*ITSSAYLWTESTYHYTTNSKLTSSKY 76
           SG   VVVL N    QY   I I    Q  T+   T S+ LW  S+  Y + + L   KY
Sbjct: 66  SGDADVVVLKNYLDAQYYGEIAIGTPPQKFTVVFDTGSSNLWVPSSKCYFSLACLLHPKY 125

Query: 75  QPS 67
           + S
Sbjct: 126 KSS 128


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,609,095
Number of Sequences: 28952
Number of extensions: 169746
Number of successful extensions: 233
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)