Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0274
         (557 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6LFK5 Cluster: RNA-binding protein, putative; n=1; Pla...    34   2.0  
UniRef50_A4UC09 Cluster: Putative uncharacterized protein; n=2; ...    34   2.0  
UniRef50_UPI0000DC0CD1 Cluster: UPI0000DC0CD1 related cluster; n...    33   3.4  
UniRef50_Q3HS75 Cluster: 33k; n=2; Porcine adenovirus 3|Rep: 33k...    33   6.0  
UniRef50_Q11ZK6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_Q54NA5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_Q5CGT9 Cluster: Putative uncharacterized protein; n=2; ...    32   7.9  

>UniRef50_Q6LFK5 Cluster: RNA-binding protein, putative; n=1;
           Plasmodium falciparum 3D7|Rep: RNA-binding protein,
           putative - Plasmodium falciparum (isolate 3D7)
          Length = 582

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +1

Query: 310 SYKNMPRCIHNYVRISLKTNREKTSASLDLRQFSVNCGMVISFIKDCCNYRNVNLSMTIV 489
           ++KN P     Y +I  KT+   T+AS    +  +N  MV+S I+   N  N++   T  
Sbjct: 39  TFKNFPGLNQKYCQIEFKTSEGITNASRLNGESLLNVPMVVSVIEPIINNTNLSELSTTE 98

Query: 490 IDKRI 504
            DK +
Sbjct: 99  CDKNV 103


>UniRef50_A4UC09 Cluster: Putative uncharacterized protein; n=2;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 550

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +1

Query: 256 SIVINGSMPFCQNTGFL-ESYKNMPRCIHNYVRISLKTNREKTSASLDLRQFSVNCGMVI 432
           +I++N ++P C     L   Y  + R +   V  +L  + EK+  ++D+     NC +++
Sbjct: 318 AILVN-TLPSCYWMLLLIHLYPELHRELQKEVDAALLIDEEKSHITIDITSVKNNCPLLL 376

Query: 433 SFIKDCCNYRNVNLSMTIV 489
           S  K+   YR +  ++ IV
Sbjct: 377 STFKESLRYRGMGTALRIV 395


>UniRef50_UPI0000DC0CD1 Cluster: UPI0000DC0CD1 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC0CD1 UniRef100 entry -
           Rattus norvegicus
          Length = 270

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 23/87 (26%), Positives = 38/87 (43%)
 Frame = -3

Query: 525 HTVYLITYSLIDYYRHR*VHITIVTAIFNKTYHHTTIYRKLTQIE*RRSFLSIRLQRYTY 346
           H VY  T++ I  + H   HI   T I    + H  +Y  +       +  S+ + R  Y
Sbjct: 26  HNVYPYTHTHIHTHTHIHAHIHTCTHIHTHLHTHEYLYSHIYIYLHACTHRSVFIHRDMY 85

Query: 345 IVMYTSWHIFVRLQKARVLTKWHAAIY 265
           I  YT  H+++ +     + K H +IY
Sbjct: 86  INTYTYIHMYINMYTHMHVYK-HVSIY 111


>UniRef50_Q3HS75 Cluster: 33k; n=2; Porcine adenovirus 3|Rep: 33k -
           Porcine adenovirus 3 (PAdV-3)
          Length = 287

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 16/64 (25%), Positives = 32/64 (50%)
 Frame = +1

Query: 25  SRGSSHVSKKQASVVAPHAFRWSEENRGRNTSKQV*SLATEASAGHPSHAASTIESSTPR 204
           S  S  +S+++ SVV   A RW++ +  R++   +   A  A+A  P+H +       P 
Sbjct: 111 SSSSKSISQRRNSVVPSEARRWNQTSIHRSSQPAISRKAAAAAAAEPAHVSQLRAKIFPT 170

Query: 205 VLSV 216
           + ++
Sbjct: 171 LYAI 174


>UniRef50_Q11ZK6 Cluster: Putative uncharacterized protein; n=1;
           Polaromonas sp. JS666|Rep: Putative uncharacterized
           protein - Polaromonas sp. (strain JS666 / ATCC BAA-500)
          Length = 411

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 1   CRNSARGKSRGSSHVSKKQASVVAPHAFRWSEENRG 108
           C+   +G SR +SH+++K+A     H F W     G
Sbjct: 33  CKTKVKGDSRTTSHITQKRAFQNVMHVFEWLRRELG 68


>UniRef50_Q54NA5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1192

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = -3

Query: 522 TVYLITYSLIDYYRHR*VHITIVTAIFNKTY-HHTTIYRKLTQIE*RRSFLSIRLQRYTY 346
           TV+L+++ L D    R  HIT++T  F+K Y +   I  K+++++  + F         +
Sbjct: 603 TVFLLSHKLWDKKSGRRQHITMITKTFSKWYINILKIKIKISKVDYPKDFPQF------H 656

Query: 345 IVMYTSWHIFVRLQKARVLTKWHAAI 268
           I +   + I  ++ + RVL KW  ++
Sbjct: 657 ITLKERFKIIWKIIEKRVLGKWRYSL 682


>UniRef50_Q5CGT9 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium hominis
          Length = 537

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +1

Query: 292 NTGFLESYKNMPRCIHNYVRISLKTNREKTSASLDLRQFSVNCGMVISFIKDC 450
           N  +   Y+N  + I + V +  +++ EK +ASL + Q S+   +   FI+DC
Sbjct: 341 NFAYSRFYRNNRKVISDIVTLKTRSSEEKLAASLAIGQ-SIRLSLFEDFIEDC 392


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,137,151
Number of Sequences: 1657284
Number of extensions: 9595266
Number of successful extensions: 24111
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24095
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)