Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0273
         (496 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY308063-1|AAQ75554.1|  290|Caenorhabditis elegans EXC-4 protein.      79   1e-15
AL132876-18|CAD21669.2|  290|Caenorhabditis elegans Hypothetical...    79   1e-15
Z81561-1|CAB04552.2|  550|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z70783-7|CAA94858.1|  239|Caenorhabditis elegans Hypothetical pr...    28   3.2  
AF099925-13|AAC69503.2|  287|Caenorhabditis elegans Hypothetical...    28   3.2  
Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    27   5.7  

>AY308063-1|AAQ75554.1|  290|Caenorhabditis elegans EXC-4 protein.
          Length = 290

 Score = 79.4 bits (187), Expect = 1e-15
 Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
 Frame = +3

Query: 111 EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDM 290
           +I  NG      P +EL +KAS ID RR GA LFCQE++M+LY L E+    ++V TV++
Sbjct: 6   QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV 64

Query: 291 QKPPPDFRTNFEATHPPILI--DNGLAILENEKIERHIMKSVPGGH-NLFVQDKEVASLI 461
                 F+ NF    PPI+I  +  L   +N +IE  I       +  LF +D      I
Sbjct: 65  NSEA--FKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 122

Query: 462 ENLYSKLKLVL 494
           ENLY   KL L
Sbjct: 123 ENLYRNFKLFL 133


>AL132876-18|CAD21669.2|  290|Caenorhabditis elegans Hypothetical
           protein Y105E8A.22 protein.
          Length = 290

 Score = 79.4 bits (187), Expect = 1e-15
 Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
 Frame = +3

Query: 111 EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDM 290
           +I  NG      P +EL +KAS ID RR GA LFCQE++M+LY L E+    ++V TV++
Sbjct: 6   QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV 64

Query: 291 QKPPPDFRTNFEATHPPILI--DNGLAILENEKIERHIMKSVPGGH-NLFVQDKEVASLI 461
                 F+ NF    PPI+I  +  L   +N +IE  I       +  LF +D      I
Sbjct: 65  NSEA--FKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 122

Query: 462 ENLYSKLKLVL 494
           ENLY   KL L
Sbjct: 123 ENLYRNFKLFL 133


>Z81561-1|CAB04552.2|  550|Caenorhabditis elegans Hypothetical
           protein K03D10.3 protein.
          Length = 550

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +3

Query: 216 QEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTN 320
           + Y ++ +++  +K +   +  +D +KPP + RTN
Sbjct: 38  KRYMVEKFIINTVKKVVAVIIHIDFRKPPQEVRTN 72


>Z70783-7|CAA94858.1|  239|Caenorhabditis elegans Hypothetical
           protein ZK856.10 protein.
          Length = 239

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 147 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAE 251
           P ++ +I+A  I   R+G CL  Q +F D+++ AE
Sbjct: 79  PFVDEVIEAKVIGSSRQGLCLTIQ-FFEDIFVPAE 112


>AF099925-13|AAC69503.2|  287|Caenorhabditis elegans Hypothetical
           protein K01A2.1 protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 300 PPDFRTNFEATHPPILIDNGLAILENEKIERHIMKS 407
           P D RT F A HP + ID  +  L  E+I  + ++S
Sbjct: 147 PKDGRTLFSARHPTVTIDKRIKKLAAERIITNKIRS 182


>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 345 LIDNGLAILENEKIERHIMKSVPGGHNLFVQDKEVA 452
           +IDN  A L+ +K + H+ K V    N   Q  EVA
Sbjct: 349 VIDNSFANLDEKKCQPHVAKCVHDALNAAYQRHEVA 384


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,109,359
Number of Sequences: 27780
Number of extensions: 255685
Number of successful extensions: 694
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)